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Natural Prodcast Episode 9: Roger Linington
… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to … in making this happen. We had a really fun conversation with Roger about all this, in terms of how to build an … products field as it relates to structure elucidation and genome mining, and how we might start to better connect …
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Natural Prodcast Episode 17: Cassandra Quave
Hey everybody! Welcome back for Natural Prodcast episode 17. The guest we have this week is Professor Cassandra … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … it’s not that easy. There are still not that many plant genomes, certainly nowhere close to bacterial kinds of …
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Natural Prodcast Episode 15: Katherine Duncan
… of conversations that we’ve had on this podcast, the idea of taking all the different natural products data that … was really before– or kind of around about when the first genome sequencing was done. But natural products– marine … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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Natural Prodcast Episode 24: Jackie Winter and SMC
UDWARY: Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, … Breaking Bad, I guess. But no, you trained me in how to genome mine, so thank you for that. And you had to put up … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …
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User Support
… science. DOE JGI Project Managers collaborate with users to develop project requirements, define the scope of work and … of your sequencing project at any time by logging on to the Genome Portals using your JGI login. After … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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JGI Portals
Our data platforms are a key resource for the broader scientific community and require constant developments … of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to … over 15 million viral genomes and fragments, enriched with functional annotation, taxonomic classification, and …
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Annotation of metagenome short reads using proxygenes
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An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies
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Mission
JGI Mission As a U.S. Department of Energy Office of Science user facility … Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, … critical minerals and materials. Understand the assembly, function, and the behavior of microbiomes and …
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Synthetic Biology Informatics Group
… engineers in the Synthetic Biology Informatics Group develop, deploy, and maintain software that support the JGI’s … provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination and Golden Gate …
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Genome Insider
Genome Insider is a podcast that showcases the work of JGI collaborators in brief forays, connecting audiences with the people behind the science. Hear diverse voices in … talk about their groundbreaking research to better understand — and harness — the superpowers encoded in plants, …
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Jeremy Schmutz
… the completion of the human genome project in 2003, he developed sequencing, assembly, and improvement strategies for de novo sequencing of eukaryotic organisms from simple yeasts … Award … Plant Science Program … Education … Selected Publications … Awards and Honors …
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