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FICUS-NERSC/KBASE
… ( NERSC ) is to accelerate scientific discovery at the DOE Office of Science through high performance computing … the completion of a project, the JGI makes the assemblies, gene annotations, and analyses available to the community at … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …
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Community Science Program
… the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . Through this program, the DOE aims to … the completion of a project, the JGI makes the assemblies, gene annotations, and analyses available to the community at … more customized analysis, the JGI also participates in publication of results. See more details on our Review …
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DNA Synthesis Science User Advisory Committee
… and scientific relevance and quality. The Committee does not perform management functions nor do they direct the Programs’ management teams on how to operate and manage the particular Science Program. …
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Products
… percentile*) DNA Synthesis Constructs <5kb in size Single gene or multiple small genes assembled to less than 5kb in … Draft Whole genome shotgun sequencing.  Sequencing methodology  varies depending on genome characteristics, … over the previous quarter. In general, projects that do not require any rework will have the fastest cycle times, …
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FICUS
… to request the capabilities and expertise of multiple DOE National User Facilities in one research proposal.  … the capabilities across at least two of the facilities, and generate datasets beyond what each of these facilities could … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …
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User Support
… a number of activities to facilitate world-class science. DOE JGI Project Managers collaborate with users to develop … of the project’s completion and receive instructions for how to access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Data Policy
Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the … of certain types of data to support their use by those generating data. The JGI Data Policy applies to research … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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Eelgrass Proves to Be Much Younger Than We Thought
Recent study shows eelgrass has been around about 2.5 million years less … ocean — occupying just 0.2% of the ocean floor, these meadows are responsible for almost one-third of carbon … also shows the younger meadows in the Atlantic ocean are much less diverse than their Pacific Ocean ancestors — …
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How Filamentous Fungi Sense Food
Tracing gene regulatory networks in the model fungus  Neurospora … and decide on the order in which this fungus breaks down plant cell wall materials including lignin, cellulose … chemicals. Summary Filamentous fungi are like handymen who show up at a job site for a task that requires a flathead …
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A renaissance for the pioneering 16S rRNA gene
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… while fungi deliver water and nutrients. In order to do so, these organisms share space at cellular scale: fungi … interaction up close, using RNA sequencing to understand gene expression: one of the first cross-kingdom … of this symbiosis at the cellular level — really understand how those two cell types [of two different organisms] are …
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Institutional User Agreements
… data for synthesis. This agreement, required by the DOE for all work performed in its User Facilities, is a … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … will replace the active version. For researchers with a Howard Hughes Medical Institution (HHMI) appointment, a …
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