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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and … different organizations is discoverable and accessible. Linking the resources of powerful institutions like the JGI, … (ESNet), the JGI has unique access to both expertise and infrastructure to facilitate these efforts. Particular areas …
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JGI-TMF Critical Minerals and Materials Call
… The joint Critical Minerals and Materials call represents a unique opportunity … provides customized analysis, the JGI also participates in publication of results. Go here for additionial information, … review by JGI staff as well as staff at the other participating facilities, who consider technical feasibility and …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to some of the … photosynthetic algae. But human-induced climate change , a new study suggests, is displacing these important … properties,” said study coauthor Igor Grigoriev , JGI Fungal & Algal Program Head. “But still, there are no …
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JGI Portals
… The JGI’s data stewardship expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, … Notices Data Portal files will be inaccessible July 22–July 24 for computing upgrades . We regret any …
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal … insights into how these fungi have adapted to stress and host specificity, particularly regarding the effects of climate change. Summary A team led by researchers at the U.S. … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast … The Microbial Program focuses on using advanced sequencing technologies to explore microbial … This includes linking strain-level genetic variation to ecological niche adaptations.  Single cell sequencing …
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Mapping the Earth’s Hidden Fungal Kingdom
… Leveraging massive comparative genomics to decode millions of … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations … techniques can successfully predict fungal lifestyles and ecological niches from genomic features alone. In one major …
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FICUS Overview
… The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 to encourage and enable researchers to more easily … provides customized analysis, the JGI also participates in publication of results. … review by JGI staff as well as staff at the other participating facilities, who consider technical feasibility and …
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Natural Prodcast Episode 9: Roger Linington
… of Natural Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser University in British Columbia, … discovery, predominantly in diseases of importance to each host country. It was built very much on the foundations of … more to be gained than just subject matter, by making that change. So I went to the University of British Columbia, in …
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Natural Prodcast Episode 15: Katherine Duncan
… world and how we relate to that. And so I read those and changed my degree to chemistry, so I have an undergraduate … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to … naturalprodcast.com . Special thanks, as always, to my co-host Alison Takemura. If you like Alison, you want to hear …
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Plant Program
… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global challenges by exploring plants’ role in capturing carbon, detoxifying soils, … with other organisms, and adapting to environmental changes. The program lays the groundwork for sustainable …
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Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … of background. My name is Dan Udwary. I – as well as my co-host, Alison Takemura, whose voice you’ll hear in a minute – … slash natural product. And, can you just use that interchangeably? DAN: Sure. I mean, maybe — First, we can say, if …
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