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Frequently Asked Questions: Project Management
Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA … To update your email address, click the “Request email change” link. This will generate an email that will go to an … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … …
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JGI Portals
… and require constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal … metatranscriptomes. It provides rich data such as inferred host taxonomy, conjugation potential, antibiotic resistance … while also encouraging community engagement and data exchange. … Phytozome is the JGI's Plant Comparative Genomics …
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FICUS Overview
The Facilities Integrating Collaborations for User Science (FICUS) initiative was … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …
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Computationally Classifying Fungal Lifestyles
Machine learning methods were applied on sequenced fungal … insights into how these fungi have adapted to stress and host specificity, particularly regarding the effects of climate change. Summary A team led by researchers at the U.S. …
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Natural Prodcast Episode 9: Roger Linington
… of Natural Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser University in British Columbia, … discovery, predominantly in diseases of importance to each host country. It was built very much on the foundations of … more to be gained than just subject matter, by making that change. So I went to the University of British Columbia, in …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to some of the … photosynthetic algae. But human-induced climate change , a new study suggests, is displacing these important … properties,” said study coauthor Igor Grigoriev , JGI Fungal & Algal Program Head. “But still, there are no …
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How to Submit Sequencing Samples
… the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and tracking …
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Natural Prodcast Episode 15: Katherine Duncan
… world and how we relate to that. And so I read those and changed my degree to chemistry, so I have an undergraduate … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to … naturalprodcast.com . Special thanks, as always, to my co-host Alison Takemura. If you like Alison, you want to hear …
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Plant Program
… with other organisms, and adapting to environmental changes. The program lays the groundwork for sustainable … advances our understanding of plants’ biological and ecological roles to foster sustainable solutions for energy, … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — … the soil below a pine or an oak tree, in Sweden or Quebec.  Ecologically, Martin suggests this redundancy is protective, … said. An effort called the 1000 Fungal Genomes project changed that. This is a multi-year project in collaboration …
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Secondary Metabolites Program
… growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … under standard laboratory conditions by their native hosts. We are developing cell-free based systems to express … Card toolkit (HERC-tk) to enable users to identify the best host to express their BGC(s). This is based on extensive …
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Events
…  Learn about meetings the JGI is hosting:   … New Lineages of Life (NeLLi) … Viral EcoGenomics & … about upcoming user-focused webinars and workshops we're hosting. …
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