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Natural Prodcast Episode 15: Katherine Duncan
… here today, and we wanted to talk to her about a whole list of things. So we have a Scripps background shared together, … that’s just incredible to think about. And then, from an genomic point of view, I mean, I don’t need to say to you, … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … on DNA sequencing and synthetic biology. But also the metagenomics and gut microbiome, as I think that it’s like a … this collection in total contains approximately 100,000 bacterial strains, and a hundred thousand fungal strains. …
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Natural Prodcast Episode 19: Bill Fenical
… for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill … unpalatable. And we know that this is one of the major adaptations in the ocean. So it took a while to convince … in the process. We now have cell pellets. And we’re pulling genomic DNA out of those cell pellets. So, we’re about ready …
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FICUS Overview
… for User Science (FICUS) initiative was established in 2014 to encourage and enable researchers to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National … provides customized analysis, the JGI also participates in publication of results. …
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Natural Prodcast Episode 12: Nadine Ziemert
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … I think GTDB also started that. But I think taxonomy and genomic data are still kind of a mess. DAN UDWARY: Yeah, …
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JGI@25
… Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. … that showcase our collaborations and capabilities to enable great science that will help solve energy and … Notable Stories …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make … about several different pieces of her work, including bacterial quorum sensing and its effects on regulation of … is you will mix together your receptor of interest with genomic DNA, and then allow that to bind. Your receptor also …
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Fungal Friends or Foes in Plant Roots
… host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with … boost yields for both food and for candidate bioenergy feedstock crops. Summary A plant is like an office building, its … of the key community participants and enabling future metagenomics studies.   …
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User Programs
… and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.    Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics JGI-TMF Critical Minerals and Materials Status …
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JGI Advisory Committees Code of Conduct
… Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core … Fagnan, Chief Informatics Officer Len Pennacchio, Deputy of Genomic Technologies Axel Visel, Deputy for Science Programs …
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Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … been dominated for … well, as long as I can remember, by bacterial research.  So it was great to hear her passion and … every environment you can think about.   DAN: What kind of genomic resources are available these days for the natural …
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DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  Actual Total*   Actual % of Goal   Goal (hours)**   Actual Total   Actual % Goal   FY … new computational developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – …
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