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… improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is … manipulation in the laboratory. Both germplasm (sequenced mutants and natural accessions) and protocols … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … in the early 2000s called Ecopia, which was a very early genome mining company, back when DNA sequencing of natural … And at the time, it was really exciting when people would sequence [DNA]. The genome was– well, that hadn’t really …

JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the … Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, … in doing so enabled the JGI to be the first to publish the sequence analysis of the target chromosomes 5, 16, and 19, …

Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National …

Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us … association that might help? Like, if you have an unknown sequence or new flavin monooxygenases, you could say, oh …

… as user facility that aims to provide access to state-of-the-art DNA synthesis and assembly technologies to the … We focus our efforts on integrating database mining and sequence design with scaling the production of large, … developing methods for converting digital information from sequence databases into biotechnological or environmental …

Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … and Environmental Research under Award Number DE-SC0018420. The work conducted by the U.S. Department of Energy …

The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … but highly recommend using the workflow in  GNPS2 .   … In support of user science, the JGI Metabolomics …

Software engineers in the Synthetic Biology Informatics Group develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program .  … tool BOOST , which provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination …

Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass  … and Environmental Research under Award Number DE-SC0018420. The work conducted by the U.S. Department of Energy …