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JGI Portals
… constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. … The JGI Genome … genomes, and to conduct comparative and genome-centric analyses of fungi and community annotation. … Phycocosm is a …
Learn more
Natural Prodcast Episode 21: Elizabeth Parkinson
… schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make … 10 to the negative 9th. Picomolar, 10 to the negative 12th. DAN: Yeah. So very-- BETSY PARKINSON: Very, very-- … is you will mix together your receptor of interest with genomic DNA, and then allow that to bind. Your receptor also …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … on DNA sequencing and synthetic biology. But also the metagenomics and gut microbiome, as I think that it’s like a … predict where in particular areas, or particularly as by ecological niches, the natural product could be there. So …
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Understanding Wildfire Recovery, Starting in Soil
A metagenomic look at the soil microbes present a year after a … begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, … post-wildfire soil microbiomes have focused on marker gene analyses, which take inventory of which microbes are …
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CSP Large Scale Call
The Community Science Program Large Scale Call is focused on genomic science projects that address sustainable biofuel and bioproducts production, leveraging systems-based …
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User Support
The JGI Project Management Office carries out a number of activities to facilitate … collaborate with users to develop project requirements, define the scope of work and outline roles and responsibilities … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… as many as it did and how that became sort of a trend in genomics. So anyway, yeah, JGI has been working in secondary … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … any kind of association with the potential like, what’s the ecological role? So there’s a lot there that the databases …
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FICUS-NERSC/KBASE
… community as a user facility pioneering functional genomics to solve the most relevant bioenergy and … the JGI makes the assemblies, gene annotations, and analyses available to the community at large. In most cases … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …
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JGI@25
Celebrating 25 years of genomics research 2022 marked the JGI’s 25th …
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JGI Advisory Committees Code of Conduct
Guiding Principles All staff members of the US Department of … Fagnan, Chief Informatics Officer Len Pennacchio, Deputy of Genomic Technologies Axel Visel, Deputy for Science Programs …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… the slightly murky waters in the tube look like a scoop of stormwater, complete with leaves, debris, and even … in Complex Systems (LRC) in Menlo Park, Calif. In the June 24, 2022, issue of the journal Science, Volland and … Université des Antilles, described the morphological and genomic features of this giant filamentous bacterium, along …
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User Support Analysis Group
We perform analysis for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product …
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