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FICUS Overview
… to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National User Facilities into … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …
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Natural Prodcast Episode 3: The Primer, Part 3
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … able to explore DNA sequencing and actually get to the DNA sequence – sequences for the genes that code for the …
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Frequently Asked Questions: Project Management
… listed on the “info” page for that organism on the Genome Portal . … You can view the status of all public … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … … I request a culture/slant/DNA of an organism that has been sequenced at the JGI? … How do I check the current status of …
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User Support
The JGI Project Management Office carries out a number of activities to facilitate … of your sequencing project at any time by logging on to the Genome Portals using your JGI login. After … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Fungus Fuels Tree Growth
… start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel feedstock.     The Science … partnered with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … in order to get  M. elongata and  I. europaea  genomes sequenced and annotated for this study. The team found that, …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … fuels the discovery  of novel metabolites, genes, and proteins. It also enables exploration of energy and nutrient …
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better … nitrocellulose filters in Petri dishes. The scientists also sequenced the fungus and photobiont’s genomes and compared …
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Natural Prodcast Episode 8: Eric Schmidt
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … turns a peptide, for example, from a disordered sequence into an antibiotic that kills bacteria through a … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …
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Microbiome Data Science Team
… 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … al. (2017) Protein structure determination using metagenome sequence data. Science   355(6322):294-298 Paez-Espino D. et … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …
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Genetic Bases of Fungal White Rot Wood Decay Predicted by Phylogenomic Analysis of Correlated Gene-Phenotype Evolution
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Natural Prodcast Episode 19: Bill Fenical
… for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And … forward to seeing the data when it finally gets off the sequencers. The pandemic has obviously slowed JGI down a …
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Draft Genome Sequence of the White-Rot Fungus Obba rivulosa 3A-2
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