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JGI@25: The Little Alga That Could
In honor of the JGI's 25th anniversary in 2022, we have revisited a … of both plant and animal cells, it shares nearly 7,000 genes with other organisms (a third of those shared by both … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference …
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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … the shelter-in-place. ††† Actual Operation = 69 days due to reduced lab activities related to the return-to-work plan in …
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Natural Prodcast Episode 20: Brian Bachmann
… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell you about in this introduction. First … It was unpublished at that point. But people would push out gene clusters maybe once a month at most. Maybe twice a …
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Bayesian Analysis of Congruence of Core Genes in Prochlorococcus and Synechococcus and Implications on Horizontal Gene Transfer
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Horizontal gene transfer and gene dosage drives adaptation to wood colonization in a tree pathogen
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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … pathways, and that really helped me to get an idea how diverse the secondary metabolites are, even if primary … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… right. Welcome back to Natural Prodcast. I did it. I’m keeping to my schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make … oftentimes will bind to receptors within biosynthetic gene clusters. Specifically, these are Tet repressors that …
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Genomic differentiation among wild cyanophages despite widespread horizontal gene transfer
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … and the microalga,  Asterochloris glomerata . To see how gene expression changes when living together versus apart, … hundreds of millions of years, accidental gene swaps via horizontal gene transfer would have occurred between the …
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JGI Portals
… and require constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial … host taxonomy, conjugation potential, antibiotic resistance genes, and ecosystem information. … The IMG/VR database …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
P. psychrophila genes drive resilience when salinity fluctuates. The Science The Arctic microalga … ice in the Arctic has decreased by more than 30% in terms of quantity and thickness. Replacing older, thicker ice with …
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Genome Analysis of Planctomycetes Inhabiting Blades of the Red Alga Porphyra umbilicalis
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