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Natural Prodcast Episode 11: Marnix Medema
… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s … a nice video. Alison Takemura: Marnix, It’s just from the biological perspective, like what was this bacterium, and … Marnix and his collaborators have a fantastic set of software tools for exploring secondary metabolite …
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Natural Prodcast Episode 19: Bill Fenical
… for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill Fenical from Scripps Institution of Oceanography in San Diego. Bill is a pioneer … over evolutionary time, become targeted to certain biological systems in the target organism. So, if you want …
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Soil virus offers insight into maintaining microorganisms
… Using the IMG/M data portal, researchers have identified a … effort, researchers have identified a protein in soil viruses that may promote soil health. The work was enabled in part by a community data portal of the U.S. Department of Energy (DOE) Joint Genome …
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JGI@25
… Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable achievements that showcase our collaborations and …
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How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and … sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting …
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Metagenomic stable isotope probing reveals bacteriophage participation in soil carbon cycling
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CSP Functional Genomics
… Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate genomic information into biological function.  The emphasis is on projects leveraging … data usage by the applicant/community, and track record of the applicant.  Learn about the general review process or …
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Natural Prodcast Episode 6: Marc Chevrette
… DAN: You’re listening to the US. .Department of Energy Joint Genome … for antibiotics and the microbes that make them is in the soil. There’s … uh… there’s an issue there though, in that … This is Episode 6 of Natural Prodcast, our conversation with Marc Chevrette, a …
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Understanding Wildfire Recovery, Starting in Soil
… A metagenomic look at the soil microbes present a year after a wildfire. The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, … Sciences Laboratory (proposal ID 49615), which is a DOE Office of Science User Facility. This facility is sponsored …
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User Support
… Effective July 27, 2026, the JGI will move to a new login service, requiring the use of an ORCID account with two-factor authentication enabled … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Biodesign
…   The Joint Genome Institute's Biodesign Platform capabilities support researchers exploring how to convert sequence into functional assessments. … automations for DNA design, assembly and analysis Overview of biodesign products The JGI Biodesign platform enables …
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Multi-omics reveals nitrogen dynamics associated with soil microbial blooms during snowmelt
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