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… Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to … we nurture in our workplace and seek to establish with our stakeholders. In working toward a shared vision …

… The central mission of the JGI’s Genomic Technologies department is   ensuring … .  Many users rely on a multifaceted combination of genomic, transcriptomic, proteomic, phenotypic, … analysis. To meet these needs, the JGI deploys state-of-the-art sequencers and platforms dedicated to synthesis, …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … yes, sure, right. And yeah, so we worked on the Salinospora genomes. That was a really fun project. We had Brad on and … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …

… well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our users. This … the Sequencing Technologies team, relies on collaborations with Science Programs and Operations teams to enable the … An assay used for profiling transcription factor binding sites across entire …

… add the characters “.gb” (no quotes, just .gb) to the end of your file name. …

… growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million … for plant genomes. They are annotated with the JGI Plant Annotation pipeline, which provides high quality comparisons … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …

… JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative … provided by Sara 4.  Q(uestion): Are all CSP produced data automatically assembled and run through your annotation pipeline then added to PhycoCosm (if relevant)? …

… The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works with users, JGI scientists and technical staff to onboard … Please review our FAQ in advance of contacting the PMO office.  … start on any approved proposal – including the submission of samples for sequencing, or the submission of sequencing …

… Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of … technology in order to enhance the quality of single-cell genomes and directly link functional information with individual cells. Research Team    …

… The JGI is leveraging its current partnerships to offer new capabilities and resources to users through a BER … is discoverable and accessible. Linking the resources of powerful institutions like the JGI, KBase, NCBI, NMDC, … that deepen our understanding of how organisms interact with each other and with their environment and help unravel …

… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … senior author of the study and head of the JGI’s Microbiome Annotation Group. Many of these bacterial and archaeal … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …

… See below for a list of Frequently Asked Questions about our proposal submission process. You can review successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call link to see specific … supported, sample/capacity limits, and instructions.  Many of the submissions are done using web-based forms.   To view …