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User Support
… the JGI will move to a new login service, requiring the use of an ORCID account with two-factor authentication enabled … and coordinating with IMG , GOLD and others for data annotation and submission Tracking, monitoring and … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Natural Prodcast Episode 20: Brian Bachmann
… DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … mining-based approaches are that other than resistance genes, you have no way of knowing of whether or not a … or you could look at metabolism markers like phosphoprotein S6. So if there is a perturbagen present– DAN …
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Natural Prodcast Episode 14: Nigel Mouncey
… DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took … team who have been really looking at ways to express genes in organisms that haven’t been used for really any … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  Actual Total*   Actual % of Goal   Goal (hours)**   Actual Total   Actual % Goal   FY … PDF] Q3 – Report on new computational approaches for the annotation of genomic data. [Download PDF] Q4 – Report on a …
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Doubling Down on Known Protein Families
… online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … to better understand microbial communities by looking at protein function within them. The work was led by a team of … call “known knowns” — that is, they are similar to genes with known function. Others are called ‘known …
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Institutional User Agreements
… starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The … an A, C, T or G in a genome sequence can lead to changes in protein structures and functions, but the DNA bases … – similar to the MAC clusters for 6mA), rather than in genes, which suggests that 5mC may play a role in genome …
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Igor Grigoriev
… Dr. Grigoriev joined the JGI in 2003, following his postdoctoral training at … at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of … He contributed to the Human Genome Project and led annotation and analysis of diverse eukaryotic genomes, from …
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Data Policy
… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … the need to have a limited and time-sensitive protection of certain types of data to support their use by those … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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JGI-TMF Critical Minerals and Materials Call
… The joint Critical Minerals and Materials call represents a unique … for researchers to request the capabilities and expertise of both the Joint Genome Institute and the Molecular Foundry … provides customized analysis, the JGI also participates in publication of results. Go here for additionial information, …
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Natural Prodcast Episode 19: Bill Fenical
… for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill … molecules that bound inside the cells to tubulin, these proteins that allow the cells to divide. We found all sorts … then of course using modern phylogenetic tools measuring genes, the 16S gene, and comparing it with everything that’s …
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Natural Prodcast Episode 16: Marcy Balunas
… know that that’s ever necessarily like a good description of anyone because chemistry means a lot, especially when … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … easy to search for because there are patterns of domains, protein domains that you look for. And if you find those all …
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