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Mission
… JGI Mission As a U.S. Department of Energy Office of Science user facility, we provide … AI-ready data and professional expertise to support the global research community in studies of complex biological … Biological systems hold extraordinary potential to power innovation …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… Team develops a computational pipeline to sift and … of white. To researchers searching for sequences of RNA viruses in large data sets, their work may be akin to … one of the senior authors on the paper, of the uncovered viral diversity. “Although the technical challenges of data …
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An Automated Tool for Assessing Virus Data Quality
… CheckV can help researchers assess virus sequence fragments and data … and best practices for characterizing uncultivated viruses. Following up on those guidelines, JGI researchers … assess and improve the quality of metagenome-assembled viral genomes . The Impact The microbes that play key roles …
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You Can Move, But You Can’t Hide
… Researchers at the JGI develop a tool to quickly and accurately … identify mobile genetic elements like plasmids and viruses. The Science Mobile genetic elements (MGEs) are … IMG Virus Resource (IMG/VR) , now with more than 15 million viral genomes. It was also key to developing the first …
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Natural Prodcast Episode 8: Eric Schmidt
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of … Episode Transcript … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …
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Analyze Data
… The JGI supports the entire data life cycle — from experimental design to reuse. Armed … The JGI is involved in efforts to integrate data in support of new research questions that span domains. We also work with our partners to build infrastructure in support of new analysis techniques.  Notice …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep subsurface ecosystem. The … are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are abundant … This work received funding by the Alfred P. Sloan foundation (grant number G-2017-9955), the …
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JGI Advisory Committees Code of Conduct
… Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute … foster a respectful, collaborative environment free of harassment. To uphold Berkeley Lab’s enduring 90-year legacy of …
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JGI on the 2021 Highly Cited Researchers List
… Congratulations to the 2021 Highly Cited Researchers at the JGI! … influence in their chosen field or fields through the publication of multiple highly cited papers during the last … detected in the samples. Simon Roux co-organized the Viral EcoGenomics & Applications (VEGA) Symposium series. …
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Natural Prodcast Episode 20: Brian Bachmann
… DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell you about in this … Episode Transcript … Natural Prodcast is proud to welcome Professor Brian Bachmann, from the …
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User Support
… Notice Effective July 27, 2026, the JGI will move to a new login service, requiring the use of an ORCID account … carries out a number of activities to facilitate world-class science. DOE JGI Project Managers collaborate with users … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Viral community analysis in a marine oxygen minimum zone indicates increased potential for viral manipulation of microbial physiological state
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