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Natural Prodcast Episode 20: Brian Bachmann
… … DAN UDWARY: Hey everyone and welcome back to a new session of … went on to work at a groundbreaking company in the early 2000s called Ecopia, which was a very early genome mining … –what you need is what JGI is providing, which is a giant warehouse full of microbial sequences. So let’s say …
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome … Nature Microbiology 4, 1895–1906. Schulz et al., 2020. Giant virus diversity and host interactions through global … Microbiology Resource Announcements … Education … Selected Publications … Awards and Honors …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep … are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are abundant … genetic elements by incorporating short sequences from infecting viruses and phages. In these sequences are virus …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Team develops a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book … a colored-in page of that book. Published online September 28, 2022, in Cell , a team led by researchers at Tel Aviv …
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Ecology and evolution of viruses infecting uncultivated SUP05 bacteria as revealed by single-cell- and meta-genomics
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Contrasting Life Strategies of Viruses that Infect Photo- and Heterotrophic Bacteria, as Revealed by Viral Tagging
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JGI Early Career Researchers Featured in mSystems Special Issue
In a special issue of mSystems , out May 14, 2019, JGI … applied to a recent Nature Communications paper, uncovering giant virus sequences in soil for the first time. A second …
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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … even in primary metabolism or in certain snips of viruses or something. I don’t know. Then I think making sure …
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JGI Portals
Our data platforms are a key resource for the broader scientific … and analytical tools for all JGI sequencing projects. In 2021, the JGI launched the Data Portal to eventually replace … — Plasmid Resources … Integrated Microbial Genomes — Virus Resources … Mycocosm … Phycocosm … Phytozome … …
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Genomic Mysteries of Giant Bacteria: Insights and Implications
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Frequently Asked Questions: Proposal Submission
See below for a list of Frequently Asked Questions about our proposal submission process. You … proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New …
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Natural Prodcast Episode 2: The Primer, Part 2
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural … to the second episode of the Natural Prodcast. This is part 2 of our “primer” episode, so if you ended up here somehow …
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