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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and … users through a BER data ecosystem.  A data ecosystem is a connected resource where data from different organizations is discoverable and accessible. Linking the resources of … specifically optimized for high-performance computing environments. …
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Partnerships: Myco-Ed
… The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based Undergraduate … genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect … links below. Naturalist Myco Ed Fungal Genomics Education Project MycoCosm MycoEd group page Protocols, teaching …
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Sequencing Technologies & Products
… which includes the Sequencing Technologies team, relies on collaborations with Science Programs and Operations teams to enable the … sequencing pipelines. This includes advanced sample management (quality assurance/quality control [QA/QC]), … profiling transcription factor binding sites across entire genomes. This technology has been further scaled to a …
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CSP Large Scale Call
… The Community Science Program Large Scale call is focused on genomic science projects that address biological functions for … of special emphasis that are listed in the call and leverage the diversity of JGI technical and analytical … to bioenergy-related feedstock crops or model plants. Projects targeting marine systems must clearly demonstrate …
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An Integrated Dataset to Understand Ecosystem Interaction
… tree and soil dataset for understanding the dynamic relationship between poplar trees and their microbial partners. The Science To … were provided by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … ) conducted by the U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office …
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University of California, Merced Internship Program
… Originally conceived as a UC Merced graduate student summer research … experience at the JGI, the Genomics Internship Program soon expanded to include undergraduate students. To date, more than 90 UC Merced students have contributed to the research of numerous JGI scientists. …
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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … that secondary metabolism is an important strategic thrust. We think by exploring more aspects of secondary … we need people from outside of the JGI to come to us with projects that will help us actually drive this strategic …
Learn more
JGI@25: The Human Genome Project, or the JGI’s Origin Story
… In honor of the JGI's 25th anniversary in 2022, we have … help solve energy and environmental challenges.   The Human Genome Project began in 1990 when the U.S. Department of Energy …
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Natural Prodcast Episode 8: Eric Schmidt
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there and welcome back for … so I’m hoping we can follow up with him again as the project progresses! If you’re interested in RiPPs, I’ll put …
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CSP New Investigator Call
… for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead PI … accepted JGI CSP or FICUS proposal.   Competitive projects will provide pilot data to assess feasibility of a …
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Plant Program
… With collaborative user projects, the JGI’s Plant Program delves into the natural … challenges by exploring plants’ role in capturing carbon, detoxifying soils, interacting with other organisms, and … efforts to create renewable energy sources and bolster agricultural resilience. The program’s discoveries support a …
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Salicylic acid activates poplar defense against the biotrophic rust fungus Melampsora larici‐populina via increased biosynthesis of catechin and proanthocyanidins
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