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FICUS
… being lack of relevance to DOE mission areas.  Initiate a new LOI by logging into the   EMSL User Portal  and clicking “Submit a Proposal/LOI” in the … Initiate a full proposal by logging into the  EMSL User Portal . All proposals undergo technical review by JGI staff …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a high-throughput AI-centric … for genomes, metagenomes, and metabolomics through its data portals. Supported by the DOE Office of Science's Biological …
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Old can be new again: HAPPY whole genome sequencing, mapping and assembly
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Natural Prodcast Episode 23: Aaron Puri
… the language of microbial cell-cell communication. And he told us about his work in inverse stable isotopic labeling, … And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that really got me into that because we had these new genomes that JGI had sequenced that were of these …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … JGI’s Integrated Microbial Genomes & Microbiomes ( IMG/M ) portal. As part of a comparative analysis, 824 new GEBA-Actino genome sequences were combined with nearly …
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Silver age of GOLD introduces new features
… The JGI’s Genomes OnLine Database celebrates 25 years as a vital … large-scale comparative genomics analysis initiatives. GOLD not only curates sequencing projects carried out at the … have spurred its growth and the continuing development of new components and capabilities. The most recent …
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Microbiome Data Science Team
… approaches in data analysis and interpretation is creating new opportunities for breakthrough discoveries and … codes (Science 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … Novel Genes. Cell 178(5):1245-1259 Nayfach S, et al, (2019) New insights from uncultivated genomes of the global human …
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Industry Engagement Program
… accessible, AI-ready large-scale data repositories for genome information with analysis tools for mining and … Science Program, the JGI sequenced and characterized 270 genomes of the Clostridium genus for LanzaTech, information that LanzaTech could use to develop new products with their production strains. To improve the …
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Sequencing Technologies & Products
… profiling transcription factor binding sites across entire genomes. This technology has been further scaled to a … DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We also apply labeling …
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Natural Prodcast Episode 6: Marc Chevrette
… DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … I worked on a team at the Broad that was looking to develop new methods for DNA sequencing of microbes. And what kept … agencies and the popular news recently because a lot of soldiers in the Iraq and Afghanistan area were coming back …
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How To Use Our Systems
… to better understand our broader community of users. Each portal lists a contact, or you can reach out via the form on …
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Project Management Office
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