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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and resources to users through a BER … (ESNet), the JGI has unique access to both expertise and infrastructure to facilitate these efforts. Particular areas … for microbiome data science, and the development of new informatics tools specifically optimized for …
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DNA Synthesis Program
… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, … The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical … These advancements contribute to the development of new biofuels and sustainable biochemicals. The DNA Synthesis …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… Meta-omics datasets show that CRISPR-Cas systems determine mutualism or parasitism between some archaeal hosts and … interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  Recently , researchers … This research was supported in part by the Allen Distinguished Investigator Program, …
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Community Science Program
… community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of … JGI capabilities, and also requires a Letter of Intent. The New Investigator call is for PIs who have never led a JGI project, and the Functional Genomics call is for projects that translate genomic …
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User Support Analysis Group
… Support Analysis group provides computational analysis for new technology development and JGI user science projects. We perform analysis for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of …
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Partnerships: Myco-Ed
… Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching … data analyses compile original data for improving fungal genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect fungi, sterilize …
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Chapter Five The Sphagnum Genome Project A New Model for Ecological and Evolutionary Genomics
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JGI@25
… Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. … references dozens of iconic JGI contributions to advancing the frontiers of environmental and energy genomics. The …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… Ancient  Chloroflexota s ditched their flagella and other traits when migrating back to the ocean. The Science Scientists have … enable organisms to swim around. However, genome and metagenomic sequencing conducted by the U.S. Department of … ) conducted by the U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE …
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The Expanding Universe of Methane Metabolisms in Archaea
… Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse … enzymes.” Gribaldo will be speaking on “Exploration of Metagenomic Data to Understand the Diversity and Evolution of … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… complexity At first glance, the slightly murky waters in the tube look like a scoop of stormwater, complete with … Université des Antilles, described the morphological and genomic features of this giant filamentous bacterium, along … DNA floats freely within the cytoplasm of their cells. This newly discovered species of bacteria keeps its DNA more …
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JGI Advisory Committees Code of Conduct
… Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute … Fagnan, Chief Informatics Officer Len Pennacchio, Deputy of Genomic Technologies Axel Visel, Deputy for Science Programs …
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