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The Peach v2.0 release: high-resolution linkage mapping and deep resequencing improve chromosome-scale assembly and contiguity
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Non-contiguous finished genome sequence of the opportunistic oral pathogen Prevotella multisaccharivorax type strain (PPPA20T)
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Emiley Eloe-Fadrosh
Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial ecology … was a Bioinformatics Program Fellow at the Gordon and Betty Moore Foundation as part of the Marine Microbiology … microbiome research community standards. Nat Microbiol . 8(5):751-753. Nayfach A, et al. 2021. A genomic catalogue of …
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Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
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Improving Synthetic Biology Communication: Recommended Practices for Visual Depiction and Digital Submission of Genetic Designs
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Uncovering Novel Genomes from Earth’s Microbiomes
… most diverse range of samples and environments, including natural and agricultural soils, human- and animal-host … talk about genome mining using the GEM catalog in  this episode of the JGI  Natural Prodcast . Using this massive dataset, Nayfach clustered the …
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FICUS-NERSC/KBASE
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Mission
… to publish the sequence analysis of the target chromosomes 5, 16, and 19, in the journal Nature . Following this … this information freely to the public databases. In 2004, the JGI established itself as a national user … for bioenergy and bioproduction, enhance understanding of natural environmental processes relevant to DOE, and advance …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… in sustainable practices, such as biofuel production and natural fertilizers. By understanding the genetic and … FRQNT Team grant to C.L. The analyses were conducted using Digital Research Alliance of Canada-Compute Canada facilities. The work (10.46936/10.25585/60001017) conducted by the U.S. Department of Energy …
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A Shrubbier Version of Rubber
Right now, our natural rubber comes from just one tree species: Hevea … desert shrub that’s native to North America: guayule.  This episode was made in collaboration with our friends at the …
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Viral dynamics in a high-rate algal pond reveals a burst of Phycodnaviridae diversity correlated with episodic algal mortality
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Community Science Program
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