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Natural Prodcast Episode 4: Nancy Keller
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about … this, is that I don’t have an awareness of how to go about studying them. Like to me, fungi are, you know, how do you …
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Natural Prodcast Episode 3: The Primer, Part 3
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about … there. So once you could sequence DNA, then it was just a matter of time before some secondary metabolism gets …
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Taking Stock of the Known and Unknown Microbial Space
Metagenomic datasets could help map out microbial diversity hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of … sequence data generated over the past three decades, their study assesses what fraction of the microbial diversity we …
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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal … Q1 – Report on new computational developments for improving microbial, metagenomic, or plant genome assemblies. … computational method for improving the interpretation of microbial, metagenomic, or plant genomes. [Download PDF] …
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial species is made of … blue-lit twilight zone, to the continuous pressure of the dark abyss, 4000 m (2.5 miles) deep. Scientists have … SAR324 exist in so many varied environments? Now, a recent study published in Microbiome has uncovered that SAR324 …
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Fungal & Algal Program
… to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the … Program aims to streamline genome analysis workflows for microbial eukaryotes, build fungal and algal pangenomes, and … The program also explores microeukaryotic members of microbial communities, cataloging gene markers, and …
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Tanja Woyke
… primary interest and passion. Dr. Woyke stepped into the Microbial Genomics Program Lead position in 2009 and assumed … into the phylogeny and coding potential of microbial dark matter. Nature 499, 431-437. Hess et al. 2011. Metagenomic …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… from individual environmental cells. The proof of principle study built off earlier approaches and offered a way for researchers to study the planet’s microbial diversity, much of which remains unknown and … of key microbial culprits in carbon fixation in the dark ocean. Combining single cell genomics and synthetic …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… metabolites for multiple applications The planet’s microbial diversity is immense, yet much of it remains unknown. For more than a decade, researchers around the … (Berkeley Lab), to fill in these gaps of knowledge. In a study published November 11, 2022, in Cell Genomics , the …
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A Powerful Technique to Study Microbes, Now Easier
… with JGI scientists on an ambitious project: to bring in robots to help process experiments that measure microbial activity in soil. Now, the researchers and robots …
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Microtopography Matters: Belowground CH4 Cycling Regulated by Differing Microbial Processes in Peatland Hummocks and Lawns
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Metabolic reprogramming by viruses in the sunlit and dark ocean
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