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Single Cell Research Group
… genomes are critical to serve as phylogenetic anchors for metagenomes studies.  While uncovering the metabolic … information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea. …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… cool. The vanadium haloperoxidases are some really cool enzymes, and it was fun to see that project take shape. … the rest of the archaea and fungal genomes and then work on metagenomes. So yeah. So we’ve taken every public sequence … be whatever somebody has submitted to us. It could be a metagenome. We’re going to run metagenomes. That’s going to …
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Toward More Efficient Artificial Photosynthesis
… the CSP Functional Genomics call, the JGI synthesized library of genes that code for Enoyl-CoA Carboxylase/Reductase (ECR) enzyme variants. ECR enzymes are capable of fixing CO2 many times faster than … RuBisCo, the most common CO-2 fixing enzyme in nature. The library provided the Erb lab with enzymes that led to …
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A large sequenced mutant library – valuable reverse genetic resource that covers 98% of sorghum genes
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Natural Prodcast Episode 19: Bill Fenical
… 20S proteasome. The proteasome in the cell is a bundle of enzymes that is used to degrade proteins, peptides, that are … no nutrients. And we followed cultivations. We set up a library of Petri plates to watch what happens over time. And … check off the time. And here’s all these plates in this library, growing. Watching what would happen over time. And …
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Targeted Switchgrass BAC Library Screening and Sequence Analysis Identifies Predicted Biomass and Stress Response-Related Genes
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Partnerships: Adopt-A-Genome
… datasets encompassing >150,000 isolate genomes, 230,000 metagenome-assembled genomes (MAGs), and 40,000+ metagenomes along with curated environmental- and other …
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Metagenomics
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… Molecular biology has benefited from heat-stable enzymes derived from thermophiles, stabilizing the … Through the JGI’s Community Science Program , the team used metagenome assemblies, transcriptomes and single amplified …
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High-throughput SNP discovery through deep resequencing of a reduced representation library to anchor and orient scaffolds in the soybean whole genome sequence
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Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software
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Natural Prodcast Episode 18: A CSP Primer
… for you, we sequenced thousands for you or thousands metagenomes. And I think also the quality that we provide. … we also have a lot of analysis pipelines, be it for, again, metagenome, metatranscriptomes for SNP analysis if somebody … gets analyzed. And in a way that helps the PI, I think. For metagenomes and microbial genomes, in part because of the …
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