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Natural Prodcast Episode 5: Brad Moore
… things. I’m going into architecture and I did that. And looking at all those art history photos of the, you know, … first genome sequence with you. Brad: That’s right,  Dan: JGI did it in fact. Brad: That was a magical project I … identifying genes to that toxin, but it’s opened up this whole area of environmental health that we’re now working …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence Berkeley National Laboratory. The JGI consists of around 280 researchers and support staff in …
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Natural Prodcast Episode 9: Roger Linington
… let me know! I’m dying to hear from you. Toss an email to  jgi[email protected] , or leave us a review on Apple Podcasts … accuracy, sensitivity, all those things have changed beyond all recognition. What has not yet kept pace are our … roles of these compounds? Can we perform studies such as looking at the distributions of different classes of …
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Environmental Genomics Group
Research in the Eloe-Fadrosh group focuses on using genome-resolved … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture microbial and … Clum, A. et al. (2021)  DOE JGI metagenome workflow …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… month, just like I promised. Now I just have to make this whole “on-time thing” a habit! I’m really not good at that, … you guys. I’m trying really hard just for you. And the JGI Comms team. But mostly you. Anyway…I’m really happy … you get a new organism or a genome, let's say, and you're looking at clusters, is there something that kind of …
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Project Management Office
The JGI Project Management Office carries out a number of … to facilitate world-class science. PMO works with users, JGI scientists and technical staff to onboard users and guide them through the process of working with our facility. This includes help with: preparing a …
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Partnerships Development Team
Developed in 2017, the PDT was established in part to help better-connect industry to JGI resources, as well as target academic, governmental and … institutions who haven't yet partnered with the JGI. The Business Development Team works closely with the …
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JGI@25: Roots of a Mutualist Relationship
In honor of the JGI's 25th anniversary in 2022, we have revisited a number … sequence of a mycorrhizal fungus shifted the focus from looking at single organisms to applying a broader ecosystem … (INRAE). Today, there are nearly 200 mycorrhizal fungal genomes publicly available on the fungal portal MycoCosm, …
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Natural Prodcast Episode 17: Cassandra Quave
… people aspects of things, because a lot of what we do at JGI in terms of the sequencing that we do is very … bioprospecting that is often done, where we’re really just looking at DNA sequences, and we don’t always know … is I really try to find experts that are able to take it beyond that initial screen because I am not an expert in …
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Natural Prodcast Episode 19: Bill Fenical
… of marine natural products, getting into the ocean and looking for molecules from the very beginning of the field. … things I want to make sure that we talk about. You have a JGI project going with us that we want to talk a little bit … increasing our ability. And ultimately we went through a whole lot of different processes with plants and animals, …
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User Programs
For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. … who have not been a PI on any approved proposal with the JGI Investigators interested in translating genomic …
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Natural Prodcast Episode 2: The Primer, Part 2
… have that goal. That’s not as much our goal here at the JGI – we are not a medicinally focused organization. And so, … and you can see that different Frankia have different size genomes depending on what kinds of plants, and what kinds of … products. And so we’ve got another slide here, and we’re looking at a hand drawing – drawn by Selman Waxman, who was …
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