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User Executive Committee Charter
… science including technical capabilities offered, proposal review procedures, and the annual user meeting. The UEC also … including focus areas, eligibility, timing, and proposal review process; Make recommendations to the JGI regarding …
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How to Submit Sequencing Samples
… 1) Review JGI sample QC requirements and protocols Obtaining … Weight DNA extraction and quality control (from PacBio) 2) Review guidelines detailing quantity and quality requirements Please review the appropriate guidelines detailing the quantity & … Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? …
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Natural Prodcast Episode 16: Marcy Balunas
… tell us about this squid-microbe relationship. Or is it a microbial community with microbial community relationship?  … almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we … are by Jazzar. Please help spread the word by leaving a review of Natural Prodcast on Apple Podcasts, Google, …
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Natural Prodcast Episode 8: Eric Schmidt
… have Todo Olivera, who’s a renowned neuroscientist and an expert on cone snails. And so he was my introduction, and … working with the JGI is really helpful because you’ve got experts in designing promoters and so on that we can consult … are by Jahzzar. Please help spread the word by leaving a review of Natural Prodcast on Apple podcasts, Google, …
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Natural Prodcast Episode 2: The Primer, Part 2
… and you can see that different Frankia have different size genomes depending on what kinds of plants, and what kinds of … are by Jahzzar. Please help spread the word by leaving a review of Natural Prodcast on Apple podcasts, Google, … commonly-used podcast feeds. Please subscribe, and leave a review! If you have questions or comments, you can contact …
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Microbiome Data Science Team
… 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … 2018, Molecular Cell 2019) and massive reconstruction of genomes from uncultivated microbes (Nature 2019). Other … A global metagenomic map of urban microbiomes and antimicrobial resistance. Cell . 184(13):3376-3393 Almeida A, et …
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Biotech Partners
… Biotech Partners provides integrated and high-touch programs that empower …
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An Integrated Dataset to Understand Ecosystem Interaction
… the dynamic relationship between poplar trees and their microbial partners. The Science To help better understand … as the rhizosphere), researchers hope this massive and integrated data set will help identify how different … (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 metabolomic …
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Single Cell Research Group
… in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … relationships and to provide valuable reference genomes in under-populated areas of the tree of life, as …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… organisms we’re finding– at least by looking at their full genomes — are really not like anything that’s been … for those who are familiar with JGI’s IMG data portal , the Integrated Microbial Genomics, there was a subsection of that called …
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Methyl-Based Methanogenesis: an Ecological and Genomic Review
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FICUS-NERSC/KBASE
… then submits a proposal for consideration in the next review cycle. All proposals undergo technical review by JGI staff as well as staff at the other participating facilities. Reviewers consider technical feasibility and readiness to …
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