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Metabolomics
… actual molecules present in an environment that influence system behavior.  Through this identification, metabolomics … of the role small molecules play in diverse biological systems, sheds light on nutrient cycling, and leads to the … of new molecules and pathways. The JGI Metabolomics Platform delivers rich metabolite profiles from diverse …
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Evolutionary Analyses of Gene Expression Divergence in Panicum hallii: Exploring Constitutive and Plastic Responses Using Reciprocal Transplants
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Frequently Asked Questions: Proposal Submission
… See below for a list of Frequently Asked Questions about our proposal … Many of the submissions are done using web-based forms.   To view the proposal templates, go to the proposal … don’t already have an account) and click the “Begin” button for the call you are interested in. All proposals must be …
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Natural Prodcast Episode 18: A CSP Primer
… It’s been a while, but Natural Prodcast is back again for another round of episodes. If you stick around for the … Program is one of the main ways, I’d say, that other researchers work with the JGI. So, submitting proposals, and … focus within BER anymore. We really focus on terrestrial ecosystems, but we work in coastal environments, brackish …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… metabolites and associated genes are great resources for bioremediation, new agricultural applications or … through the OGG. For a long time, C-fern has served as a model for studying ferns and for teaching plant biology. It … paving the way for C-fern to expand its role as a key plant system for teaching next-generation plant biology. …
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Microbiome Data Science Team
… analysis and interpretation is creating new opportunities for breakthrough discoveries and catalyzing a major … The research efforts of the group have concentrated in demonstrating the … with a special focus on microbiome research.  These efforts include exploration of the global diversity of …
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Natural Prodcast Episode 7: Ben Shen
… of secondary metabolism.  DAN: Hello, and welcome back for Episode 7 of the Natural Prodcast. It’s been about a … it’s like a perfect storm in terms of fundamental knowledge and enabling technology, but interesting biology and a … to have an index. You have to have the computer-searching systems. So one of the enabling technologies we wanted to do …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… the structure and function of a methylthio-alkane reductase system, researchers could open avenues for using bacteria to produce ethylene and more.  Microbes … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and ready … I enjoyed teaching and just helping the next generation of researchers in natural products and in other areas. So for … hypersaline lakes– and start comparing and contrasting systems and then also comparing to the marine environment, …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial … genomes that have been sequenced by the JGI though not formally analyzed or published.  The purpose of the program … insights from sequence data, employing IMG data and tools for comparative analysis, visualization and interpretation …
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Natural Prodcast Episode 22: Alison Narayan
… the series of interviews we recorded at the Society for Industrial Microbiology and Biotechnology (SIMB) Natural … shows the pyramidalization of phosphines and predictive models that allow you to choose the right phosphine ligand … be able to use the same types of strategies to develop models. One of our limitations right now aside from having a …
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Natural Prodcast Episode 5: Brad Moore
… and SIO. Oh, I should say what those are. Brad: What’s SIO, for all those listeners out there? Dan: Scripps Institution … wanted to be true to my roots, and always work with marine systems because that’s just where my innate curiosity and … pretty exciting. But everyone was working with terrestrial systems. No one was, at that time, really working with …
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