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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the “chytrids”).  A collaborative … and Sekimoto et al . In both studies, however, Olpidium was unexpectedly grouped with non-flagellated terrestrial fungi, … albeit rather weakly. Further investigation on the source of controversy revealed that the branches among …
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Early-branching gut fungi possess a large, comprehensive array of biomass-degrading enzymes
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Synthetic Biology Lab
… as user facility that aims to provide access to state-of-the-art DNA synthesis and assembly technologies to the … mining and sequence design with scaling the production of large, difficult to synthesize constructs such as those … applications.  We are interested in:  characterizing novel enzymatic activities using phylogenomic driven …
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Mycoparasites, Gut Dwellers, and Saprotrophs: Phylogenomic Reconstructions and Comparative Analyses of Kickxellomycotina Fungi
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Bacteria and Fungi Divvy Up the Work in Forest Floor
Bacterial enzymes play second fiddle to those from fungi when it comes to breaking down tough plant fibers. The … analyzing the enzymes present in the complex organic matrix of the forest floor, a team of researchers have found that … can’t fulfill by fixing nitrogen and using it as an energy source. No fungi are known to be able to do this. JGI and …
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Honey Bee Gut Microbiota Divvy Up Dinner
Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex … of specialized bacterial enzymes. Honey bees rely on their gut microbiota to produce these enzymes to break down …
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Getting to the core of the gut microbiome
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JGI Advisory Committees Code of Conduct
Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to … Communications & Outreach Manager Tina Clarke, Human Resources Sr. Business Partner Nick Everson, Deputy of …
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Novel Viral DNA Polymerases From Metagenomes Suggest Genomic Sources of Strand-Displacing Biochemical Phenotypes
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Mapping the membrane proteome of anaerobic gut fungi identifies a wealth of carbohydrate binding proteins and transporters
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The Fungi That Survive In Antarctica
Black fungi are microscopic and mighty. They survive everywhere … organisms survive hotter, drier climates. So University of Tuscia researchers Laura Selbmann and Claudia Coleine are …
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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare and ship samples for … sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting … step for many projects at the JGI. The quality of the starting material is one of the greatest predictors …
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