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FICUS-NERSC/KBASE
The mission of the Joint Genome Institute is to serve the scientific … (HPC) and data analysis.  The DOE Systems Biology Knowledgebase ( KBase ) integrates systems biology data and tools … to DOE for final approval.  Following DOE approval, project managers negotiate project specifics with PIs …
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From Textbook to Real World Applications
When local students Maya Hanck of Carondelet High School and Tim Kostolansky of De La Salle High … biology, Robert Evans and Jan-Fang Cheng in the Functional Genomics group took it upon themselves to mentor them. …
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The Busy World of Deep Sea Eruptions
The ocean depths are vast and dark. But there are hotspots on the ocean floor — underwater volcanoes and hydrothermal … and understanding how they’ve adapted to this extreme environment.   …
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Natural Prodcast Episode 9: Roger Linington
… back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser … and doing medicinal chemistry, doing development of projects on a project-by-project basis. And the more time … had tremendous support from lots of researchers around the world. Europeans and North Americans, folks from South …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The … are also available through the DOE Systems Biology Knowledgebase, allowing researchers to immediately explore and … anything. The collaborative consortium behind the GROWdb project demonstrates not only how researchers can …
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River microbiomes from around the world: Kelly Wrighton
Kelly Wrighton and her group at Colorado State University in Fort Collins have a massive undertaking: sequencing the world’s river microbiomes. And they’re using team science to …
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Natural Prodcast Episode 5: Brad Moore
Prodcast,” a podcast about the science and scientists of secondary metabolism.  Brad Moore, UC San Diego and Scripps … in his science. And he was working with some really cool projects at that time. So I was pretty stoked to be able to … systems. No one was, at that time, really working with microbes from the ocean. So I felt there was a wonderful …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
In honor of the JGI's 25th anniversary in 2022, we have … energy and environmental challenges.   The Human Genome Project began in 1990 when the U.S. Department of Energy … among other conditions. While scientists around the world were busy sequencing the human genome, an arms race …
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct … In the ocean’s North Pacific Subtropical Gyre, microbes tend to stay localized at different depths. But … out that, without the JGI, the discoveries made in this project wouldn’t have been possible. Scientists hadn’t known …
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Natural Prodcast Episode 2: The Primer, Part 2
Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi, again. This is Dan, and you’re … we really recognize, right?  ALISON: And I tend to think of microbes as being able to secrete a lot more things than … in partnering with us, we want to hear from you! We have projects in genome sequencing, DNA synthesis, …
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Cultivating Symbiotic Antarctic Microbes
Nanohaloarchaeota cultures reveal they are symbionts and not free-living organisms. The Science Researchers … The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in environmental processes … (DP150100244) and the Australian Antarctic Science program (project 4031). The work conducted by the US Department of …
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CSP New Investigator Call
… for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead PI … accepted JGI CSP or FICUS proposal.   Competitive projects will provide pilot data to assess feasibility of a …
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