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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  Neurospora … project, which is aimed at determining the activity, expression and regulation of protein-coding genes. This first paper integrating multi-omics data from this JGI fungal ENCODE proposal was  recently published in the  …
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CreA-mediated repression of gene expression occurs at low monosaccharide levels during fungal plant biomass conversion in a time and substrate dependent manner
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Natural Prodcast Episode 12: Nadine Ziemert
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … of it. So it wasn’t only chemistry or only biochemistry or genetics. It was also ecology. It was also evolution. It was … I could see a certain time span within these biosynthetic gene clusters. There’s gene fusion going on, and then I …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast … The Microbial Program focuses on using advanced sequencing technologies to explore microbial … energy and ecosystem management. The program aims to generate high-quality genomic datasets, particularly for …
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Natural Prodcast Episode 19: Bill Fenical
… of natural products, Professor Bill Fenical from Scripps Institution of Oceanography in San Diego. Bill is a pioneer … the most effective application, of marine molecules in general. DAN UDWARY: Maybe can you explain to our audience … time, we found another molecule. This time it was from a fungal strain collected from sediments in the ocean. No, …
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Single‐parent expression drives dynamic gene expression complementation in maize hybrids
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Gene family expansions and transcriptome signatures uncover fungal adaptations to wood decay
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Widespread polycistronic gene expression in green algae
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … that produces those. So it’s not a hard and fast rule, but, generally, animals do not have secondary metabolism that we … of weird growths on livestock due to you know, bacterial or fungal infections. Yeah, okay. So he identified these things …
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Making a Lichen Together
… and the microalga,  Asterochloris glomerata . To see how gene expression changes when living together versus apart, the … Armaleo and colleagues worked with Igor Grigoriev, the Fungal & Algal Program lead at the US Department of Energy … program under Award No DE-FC02-02ER63421. The meiosis gene identification was performed in the context of work …
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Kingdom-Wide Analysis of Fungal Protein-Coding and tRNA Genes Reveals Conserved Patterns of Adaptive Evolution
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Fungal ecological strategies reflected in gene transcription ‐ a case study of two litter decomposers
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