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Meeting Code of Conduct
All participants and staff of the JGI events are required to adhere to the following Code of Conduct. Event organizers will … every participant. We invite all those who participate to help us create safe and positive experiences for everyone. …
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Corals in Hot Water Get Help From Their Microbes
As waters warm due to climate change, corals are in mortal peril. But corals comprise multiple organisms: a coral host, a photosynthetic microalgae, and a little-characterized … microbes, including their photosynthetic partner, that help them take the heat. …
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Gut Fungi: Unexpected Source of Novel Chemicals
Fungi from herbivore poop make surprisingly complex compounds — an energetically expensive feat thought to be too costly for them. The Science Anaerobic fungi, … . Yet, combing through the genomes of four anaerobic fungal species has revealed, for the first time, that this …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
Science Program. Fashioning DNA outside a cell is key to interrogating what genes do, how they work, and applying … capability to better understand a special class of compounds, or secondary metabolites, called terpenes. … changes to the pathway more quickly.  The JGI has also helped LanzaTech researchers tame gene expression in the …
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Evolution of a Fungal Gene Expression Regulator
Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. … on the largest analysis of 5mC distribution across the fungal tree of life to date, involving more than 500 species … cause poplar leaf rust, are rich in transposons, which may help the pathogens evade a plant’s defenses. Understanding …
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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI. … follow the steps outlined below. Click the drop-downs to learn more about each step in the process. If you have … of organism names (or for metagenomes, sample names).  Need help naming your organisms? See our Taxonomy Quick Guide. PM …
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Full Genome of Phialocephala scopiformis DAOMC 229536, a Fungal Endophyte of Spruce Producing the Potent Anti-Insectan Compound Rugulosin
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Help from Citrus’ Bitter, Hardier Cousin
… genome sequence of trifoliate orange yields clues to disease-resistance that could prove fruitful for … only bitter, intensely sour fruit. Yet this plant, native to China and now disseminated around the globe, often as a rootstock for  Citrus , appeals in other ways. It better …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant to living on a changing planet. Transcript for Audio   … acid metabolism, or CAM — that’s C-A-M, for short — helps plants that have it lose less water in a hot, dry …
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Frequently Asked Questions: Project Management
… https://signon.jgi.doe.gov . This account can then be used to submit proposals, sample and project metadata, and to access JGI tools and systems. … Go to the “ edit contacts … Microbial (IMG–ER) Metagenome and Single Cell (IMG/ M-ER) Fungal (Mycocosm) Algal (Phycocosm) … In general, data …
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Igor Grigoriev
DOE Joint Genome Institute in 2003, following his postdoctoral training at UC Berkeley and work in the pharmaceutical industry. He holds joint appointments as Fungal and Algal Program Head at the DOE Joint Genome … from protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 fungal …
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Supercharging SIP in the Fungal Hyphosphere
High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi The … materials can be broken down for things like biomass and  biofuels . However, AMF and the microbial communities they …
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