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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications The planet’s microbial …
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JGI Advisory Committees Code of Conduct
Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to … In working toward a shared vision with members of the JGI advisory committees, we welcome and encourage …
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DOE Metrics
… (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … platforms. **Operating Hours target is based on 98% of the total available hours.   FY 2024 DOE Metrics There … (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2024 …
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Plant Program
… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … which can reduce dependence on fertilizers. The study of secondary metabolites enhances our understanding of natural compounds …
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Products
Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … profiling of polar (e.g. amino acids, nucleosides, etc) metabolites using normal phase chromatography coupled to … analysis Relative abundance profiling of non-polar (e.g. secondary metabolites, lipids, etc) metabolites using …
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Hiroshi Otani
Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, particularly … technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he studied …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make … Parkinson from Purdue University. She’s in the Department of Chemistry and the Department of Medicinal Chemistry and Molecular Pharmacology there. We …
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Genomic Analysis of Aspergillus Section Terrei Reveals a High Potential in Secondary Metabolite Production and Plant Biomass Degradation
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Sorting for secreted molecule production using a biosensor-in-microdroplet approach
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JGI Workshop at SIMB NP Meeting
Jan. 7: New Capabilities to Study Secondary Metabolism   Although there are still a large number of secondary metabolites yet to be discovered and their biosynthetic …
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Daniel Udwary
Dr. Udwary serves as a computational biologist for JGI’s Secondary Metabolites group. His research interests lie in use and development of bioinformatics tools for elucidation of biosynthetic gene …
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Natural Prodcast Episode 23: Aaron Puri
… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … of these organisms? What’s its name? And what kind of secondary metabolism has it got? AARON PURI: Yeah. OK. So I … as we were mentioning before, of more complex secondary metabolites that an organism might want to use to affect its …
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