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Fungal Friends or Foes in Plant Roots
… other plant-associated fungi. Their analysis identified fungal gene families that help determine if these fungi act … They play key roles in maintaining the plant’s health and diversity, which can in turn boost yields for both food and … colonize roots by degrading the plant cell wall component pectin. The results therefore predicted that these …
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Partnerships Development Team
… enable research jointly sponsored by the Berkeley Lab and one or more partners for shared benefit. Industry partners … the Department of Energy announced the  2020 TCF projects . One of them supports a project between JGI and LanzaTech, a … are difficult to engineer. Yasuo Yoshikuni and his JGI colleagues have developed a technology called …
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Project Management Office
Manager Miranda Harmon-Smith DNA Synthesis and Single-Cell Genomics Vivian Ng Fungal Genomics …
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Mission
DNA sequencing, informatics, and technology development pioneered at the U.S. DOE genome centers at Lawrence Berkeley … development. Develop an understanding of microbial and fungal metabolism necessary to design communities, new … … Microbes constitute the largest reservoir of biodiversity and functional versatility on Earth. Their …
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User Programs
… call Check back Spring 2026 for the FY27 call Sept. 9, 2025 Jan. 29, 2026 Review Date June 2025 August 2025 November 2025 March 2026 …   Learn more about our …
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Frequently Asked Questions: Proposal Submission
… limits, and instructions.  Many of the submissions are done using web-based forms.   To view the proposal templates, … eligible to submit proposals, or to be listed as co-PIs or collaborators.   JGI’s standard User Agreement must be … activity. A few examples include: Convention on Biological Diversity Nagoya Protocol on Access and Benefit Sharing …
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FICUS Overview
The Facilities Integrating Collaborations for User Science (FICUS) initiative was … aims to encourage innovative research exploiting a diversity of capabilities. Previously, researchers had to … that truly integrated the capabilities of more than one facility. The FICUS initiative not only simplifies and …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
Institute (JGI), a DOE Office of Science user facility, 24 large-scale proposals have been accepted from 70 full … call included algal genomics as a focus area, and one of the accepted proposals came from Chris Bowler of … focus area was inter-organismal interactions, and two fungal proposals focus on symbiotic relationships. Jessie …
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Special Initiatives & Programs
Early Career Research Program .   If “BERSS” is not mentioned in the BER funding call, proposals are NOT eligible for … . … The JGI is inviting researchers using the U.S. Culture Collection Network (USCCN) to nominate their strains for … intended to accelerate basic research in the development of cellulosic ethanol and other biofuels, advancing the federal …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… quantities of DNA derived from individual environmental cells. The proof of principle study built off earlier … a way for researchers to study the planet’s microbial diversity, much of which remains unknown and uncultured in … a team studying microbial populations in oxygen minimum zones identified SAR11 bacteria as initiators of nitrogen …
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Metabolic potential of a single cell belonging to one of the most abundant lineages in freshwater bacterioplankton
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… aspect of viruses in the environment — their sheer genetic diversity. As pioneers of this field, the JGI has leveraged metagenomics to … and grades their quality based on completeness. Along with expanding the viral diversity that IMG/VR features, teams at …
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