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Natural Prodcast Episode 23: Aaron Puri
… natural products chemistry, and he has a project with the JGI to synthesize the genes for and explore the chemistry of … Alison is no longer with us… She’s alive! She just doesn’t work for JGI anymore! [LAUGHTER] AARON PURI: Yeah. … the community so far. But being here and then being at the Marine Natural Products meeting in Ventura where I got to …
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Fungal & Algal Program
Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental … genomes to support both basic research and applied science. By advancing fungal and algal genomics, the program … an international research team in collaboration with the JGI. Conserved Fungal Genes of Unknown Function offer a …
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User Programs
… be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.   Proposal Call FICUS … capabilities of multiple user facilities Investigators with DOE mission-relevant projects that call for expansive …
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Natural Prodcast Episode 22: Alison Narayan
… niche in chemical enzymology. So, we talked about her JGI DNA synthesis project to explore the chemical … the field of biocatalysis and what needs to be done across science to to get a point where we can predict an enzymes … perfect timing for an October podcast release. I hope that doesn’t get me canceled.The monthly schedule seems to be …
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How to Submit Sequencing Samples
… needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing … & quality requirements for samples submitted to the DOE JGI. Plate-based Preparation Guidelines DNA Preparation … sends Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… data portal I’ve been working on with my colleagues Drew Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and … long, it’s definitely because we like talking about our science. So, sorry, but not really sorry. I haven’t …
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Effects of Polar Light Cycle on Microbial Food Web
… lake microbial communities change with the seasons. The Science Light-harvesting bacteria (phototrophs) in … long ago, this shift to archaea being the main producer doesn’t occur here. Understanding this fundamental … Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published …
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Natural Prodcast Episode 6: Marc Chevrette
Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi … describe. [ Go here to learn more about Tiny Earth and the JGI’s role in the project by watching Amanda Hurley’s … all over the world in the next couple of years. DAN: What does it take to become a hub? MARC: We’re still trying to …
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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of research related to DOE’s missions in bioenergy, carbon cycling and …
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CSP Large Scale Call
The Community Science Program Large Scale Call is focused on genomic … cycling, and biogeochemistry — questions of relevance to DOE’s Office of Biological and Environmental Research (BER) … that are listed in the call and leverage the diversity of JGI technical and analytical capabilities. All proposals …
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Viral Genomics Group
… and host cell take-over by viruses, and attempts to evaluate ecosystem-level impacts of viral infections. The … Host population diversity as a driver of viral infection cycle in wild populations of green sulfur bacteria with long … and potential biogeochemical impacts of globally abundant ocean viruses.  Nature . 537:689-93. … Selected Publications …
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Natural Prodcast Episode 17: Cassandra Quave
… in the School of Medicine and College of Arts and Sciences. She’s an ethnobotanist and the herbarium curator … people aspects of things, because a lot of what we do at JGI in terms of the sequencing that we do is very … And just because you do a field study in a location doesn’t mean that you’re going to have this massive economic …
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