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Data Policy
… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our … user projects accepted FY22 and later through the Community Science Program (CSP), Facilities Integrating Collaborations …
Learn more
Natural Prodcast Episode 11: Marnix Medema
… Natural Prodcast, a podcast about natural products and the science and scientists of secondary metabolism. Hey there, … up a tiny bit and just say what antiSMASH actually is and does. Marnix Medema: Yeah. So antiSMASH. We built antiSMASH … of question have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is …
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Natural Prodcast Episode 4: Nancy Keller
… Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: … in that area?   NANCY: Oh, well, I love fungi, okay, this doesn’t even have anything to use natural products … actually, everything is funding, right, isn’t it? I thank JGI for sequencing a lot of fungi. But the thing with them – …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… data portal I’ve been working on with my colleagues Drew Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and … long, it’s definitely because we like talking about our science. So, sorry, but not really sorry. I haven’t …
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User Support
… Notice Effective July 27, 2026, the JGI will move to a new login service, requiring the use of … out a number of activities to facilitate world-class science. DOE JGI Project Managers collaborate with users to develop …
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User Programs
… be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.  … capabilities of multiple user facilities Investigators with DOE mission-relevant projects that call for expansive … research interests that integrate genomics with nanoscale science in the area of critical minerals and materials. …
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Frequently Asked Questions: Proposal Submission
… See below for a list of Frequently Asked Questions about our proposal … Many of the submissions are done using web-based forms.   To view the proposal templates, go to the proposal submission page , login using your JGI account (create one here if you don’t already have an …
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Natural Prodcast Episode 1: The Primer, Part 1
… Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey … for the US Department of Energy Joint Genome Institute, or JGI. JGI is a DOE Office of Science User Facility located at Lawrence … questions or comments, you can contact us on Twitter at @JGI or @danudwary , or by email to jgi[email protected] . We’d …
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Natural Prodcast Episode 15: Katherine Duncan
… into secondary metabolites? Kate Duncan: So I always liked science in school. I wouldn’t say I was one of these people … has been really, really fun. Alison Takemura: And then does that also– well, I guess the question really is, do … you have a question, or want to give us feedback, tweet us @JGI or to me @danudwary. That’s D-A-N U-D-W-A-R-Y. If you …
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Natural Prodcast Episode 6: Marc Chevrette
… Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi … describe. [ Go here to learn more about Tiny Earth and the JGI’s role in the project by watching Amanda Hurley’s … all over the world in the next couple of years. DAN: What does it take to become a hub? MARC: We’re still trying to …
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Metagenome Program
… diversity and metabolic potential, with implications for energy production, environmental sustainability, and … The Metagenome Program focuses on the high-throughput sequencing of microbial communities to … linked to custom interfaces and visualization tools for user analysis. Additionally, the Program works to link …
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Viral Genomics Group
… measurements ( Who is active when/where, and how? ). The JGI Viral Genomics group attempts to address this question … including especially metatranscriptomics, to better highlight and ultimately predict the main viral impacts in … towards specific phages and/or hosts. To that end, the JGI Viral Genomics group is exploring different approaches …
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