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Metabolomics
…   Metabolomics strengthens -omics technologies at the JGI by identifying the actual molecules present in an … this identification, metabolomics enables functional genome annotation, improves understanding of the role small … leads to the discovery of new molecules and pathways. The JGI Metabolomics Platform delivers rich metabolite profiles …
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Natural Prodcast Episode 22: Alison Narayan
… this description, but I’d say that Alison is not one of the more normal kinds of natural products people we usually talk … niche in chemical enzymology. So, we talked about her JGI DNA synthesis project to explore the chemical … perfect timing for an October podcast release. I hope that doesn’t get me canceled.The monthly schedule seems to be …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of … them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … in living systems, particularly as they relate to DOE missions in the bioeconomy, sustainability, and …
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Natural Prodcast Episode 11: Marnix Medema
… to try to get some funding for this thing because I needed more people to work on things, and to actually do some … up a tiny bit and just say what antiSMASH actually is and does. Marnix Medema: Yeah. So antiSMASH. We built antiSMASH … of question have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is …
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Natural Prodcast Episode 4: Nancy Keller
… coming out of that conference, and there should be a few more in the feed, that I’m releasing along with this one, at … in that area?   NANCY: Oh, well, I love fungi, okay, this doesn’t even have anything to use natural products … actually, everything is funding, right, isn’t it? I thank JGI for sequencing a lot of fungi. But the thing with them – …
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Natural Prodcast Episode 2: The Primer, Part 2
… within, say, the sponges or other things. And we know lots more about microbiomes and symbionts that live with other … have that goal. That’s not as much our goal here at the JGI – we are not a medicinally focused organization. And so, … to your cell wall, then the antibiotic, you know, doesn’t affect it anymore. And so all of those antibiotics …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… it falls short, and maybe what we should be saying to be more clear about what we mean. So if you want to learn about … and also talk about some of the great science that he does. So welcome to the show Paco Barona-Gomez from the … thing. Another way to approach it is more related to what JGI does, which is sequence genomes. And we just published …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… data portal I’ve been working on with my colleagues Drew Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and … a couple of minutes just talking to you and introducing you more properly to the audience, I guess. JACLYN WINTER: We’ll …
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Biodesign
…   The Joint Genome Institute's Biodesign Platform capabilities support … tools — including strain engineering — to make them more user accessible Synthetic Biology Informatics Group : a … assembly and analysis Overview of biodesign products The JGI Biodesign platform enables users to validate hypotheses …
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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley … The UEC represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their …
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Single Cell Research Group
… first described by Stanley and Konopa in 1985, which highlights our skewed understanding of microbial metabolism … in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … as purely based on annotation may not be sufficient. A more recent effort in the Woyke lab is therefore focused on …
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Natural Prodcast Episode 6: Marc Chevrette
… project, which you’ll hear him describe. [ Go here to learn more about Tiny Earth and the JGI’s role in the project by watching Amanda Hurley’s … all over the world in the next couple of years. DAN: What does it take to become a hub? MARC: We’re still trying to …
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