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Characterizing Communities: JGI Announces Latest CSP Portfolio
Proposals aim to sequence and annotate genomes from Antarctica to Africa to global oceans. Through the Community … of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, 24 large-scale proposals have … said Susannah Tringe, JGI User Programs Deputy. “These new CSP projects accelerate our efforts to characterize …
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Natural Prodcast Episode 22: Alison Narayan
… too, so the more robust, the better. JACKIE WINTER: Nice. DAN UDWARY: That makes sense. Yeah, it’s been a long … in the form of a heme. DAN UDWARY: A heme– [INTERPOSING VOICES] ALISON NARAYAN: So you don’t have a porphyrin around … I love about biocatalysis. You can really design your experiments in a way that’s data rich, and you can really …
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Overview of the MOSAiC expedition: Ecosystem
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Natural Prodcast Episode 10: A Primer on Genome Mining
… to be big pieces somewhere, right? The National Park Service has a great writeup on the kind of gold mining Dan is … a biosynthetic gene cluster”. And MIBiG has all of the experimentally characterized gene clusters with all of the … Catalog of Earth’s Microbiomes. Nature  Biotechnology . 2020 Nov 9. doi: 10.1038/s41587-020-0718-6) The GEM catalog …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
As SIP experiments shed more light on microbial communities than … of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley … Lab). “By offering Stable Isotope Probing as a service at JGI, we're trying to bring in a lot more people who …
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Natural Prodcast Episode 1: The Primer, Part 1
Udwary. I – as well as my co-host, Alison Takemura, whose voice you’ll hear in a minute – we work for the US Department … of Energy Joint Genome Institute, or JGI. JGI is a DOE Office of Science User Facility located at Lawrence Berkeley … because you are working in this field. DAN: Well, it’s nice to have someone who can be a sounding board and keep me …
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JGI-UC Merced Interns Share Their 2021 Experiences
Species Comparison of Plant Single-cell Transcriptomes of Rice and Arabidopsis Roots … Making Big Data Metagenomic …
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The Earth BioGenome Project 2020: Starting the clock
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Back in the Lab: the 2023 Summer Intern Experience
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Natural Prodcast Episode 7: Ben Shen
Awesome. Yeah, I’ve heard a lot of good things about Ben. Nice to meet you, Ben. BEN: Hey, yeah! Great, I’m very happy … ancient times! We know how to ferment beers or wines or rice liquors etc. So, by sequencing the genome of … – the leads that we discover, Pfizer has a right to license and anybody else has the rights to license. DAN: …
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Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… described in this webinar only offered through the CSP Functional Genomics call? A(nswer): It’s also possible … capabilities in other calls such as the  annual large-scale CSP call or through the  “Facilities Integrating … Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley …
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