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Assemblathon 1: A competitive assessment of de novo short read assembly methods
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A robust gene-stacking method utilizing yeast assembly for plant synthetic biology
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Microbial Program
… of plasmids automatically identified from genomes, metagenomes, and metatranscriptomes. It provides rich data … of Uncultivated Viral Genomes, derived from genomes, metagenomes, and metatranscriptomes, with over 15 million …
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Natural Prodcast Episode 14: Nigel Mouncey
… we’re doing. And using these together along with all of our computational tools to really build out much more of an … the products coming from these clusters. And then our computational work to link all this together and try to … at JGI. And we have two arms to the group. One is the computational work that Dan and our new hire, Drew Doering …
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Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
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Natural Prodcast Episode 23: Aaron Puri
… was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that really got … up now with JGI is we identified using some different computational methods a bunch of different syntheses that make quorum …
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Computationally Classifying Fungal Lifestyles
Machine learning methods were applied on sequenced fungal genomes to classify …
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Natural Prodcast Episode 15: Katherine Duncan
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
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Catabolic repression in early-diverging anaerobic fungi is partially mediated by natural antisense transcripts
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Dichomitus squalens partially tailors its molecular responses to the composition of solid wood
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Natural Prodcast Episode 8: Eric Schmidt
… them. And so, I spent a number of years trying various methods, back in the old days, to figure out how they’re …
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