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Gut Fungi: Unexpected Source of Novel Chemicals
In the lab, O’Malley and her team — notably, first author Candice Swift — verified that the fungi expressed … Graduate Research Fellowship Program under Grant No. 1650114, a UCSB Graduate Division Dissertation Fellowship, and the UCSB Connie Frank Fellowship. The authors acknowledge support from the Center for Scientific …
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Plant-Microbial Interactions Group
… 10.1038/s41396-020-0637-z 10.1038/s41477-024-01666-3 10.1016/j.celrep.2023.112676 10.1016/j.devcel.2022.01.008 10.1038/s42003-021-02477-4 …
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Busting the Unbreakable Lignin
… lignin can, in fact, be deconstructed without oxygen. Lead author Tom Lankiewicz cultivated anaerobic fungi … eventually yield new biotechnological opportunities.  … The authors acknowledge their funding sources: Office of …
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Viral Genomics Group
… (MIUViG).  Nature Biotech .  37 , 29–37 Roux S, et al. (2016) Ecogenomics and potential biogeochemical impacts of …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
Lovell, an evolutionary biologist at HudsonAlpha and first author of the study. “For that, it’s necessary to have the … Tom Juenger, a longtime JGI collaborator and a senior author on this study. The use of switchgrass as a feedstock … all over Texas with a shovel,” recalled study co-author David Lowry, who started as a postdoctoral fellow in the …
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Game On: High School Students Drive Everglades Metagenomics Study
… used to map their routes had been taken. Sifting through 16 Trillion Bases of DNA Taking into consideration some … The class had to sift through over 55 billion genes and 16 trillion DNA bases of data, to figure out what to study …
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JGI & KBase at PAG XXVII
Animal Genome XXVII Conference (PAG) takes place January 12-16, 2019, in San Diego, Calif. Representatives from the DOE …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… metabolic features and putative hosts,” noted study senior author  Tanja Woyke , who heads JGI’s  Microbial Program . … the megabase range. The study’s lead and co-corresponding author Frederik Schulz, a research scientist in Woyke’s … Trina McMahon, University of Wisconsin-Madison; and David Walsh, Concordia University (Canada).   … The U.S. …
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Doubling Down on Known Protein Families
… and identified many novel structure predictions,” said lead author on the paper Georgios Pavlopoulos, now a research … to predict new functions,” said  Nikos Kyrpides , senior author of the study and head of the JGI’s  Microbiome Data … Azad, Simon Roux, Lee Call, Natalia N. Ivanova, I Min Che, David Paez-Espino, Evangelos Karatzas, Novel Metagenome …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… may be akin to finding a single snowflake on a colored-in page of that book. Published online September 28, 2022, in … a senior investigator at the NCBI and one of the senior authors on the paper, of the uncovered viral diversity. … Tel Aviv University, one of the project co-leads and first author of the study. Members of the Tel Aviv and NCBI teams, …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
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Jeremy Schmutz
… co-led the team that finished the DOE human chromosomes 5, 16, and 19. Following the completion of the human genome …
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