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Viral Genomics Group
… critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at improving our collective … Coclet, C. and Roux, S. (2021) Global overview and major challenges of host prediction methods for uncultivated …
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JGI Advisory Committees Code of Conduct
Guiding Principles All staff members of the US Department of … Fagnan, Chief Informatics Officer Len Pennacchio, Deputy of Genomic Technologies Axel Visel, Deputy for Science Programs …
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Sequencing Submission Requirements for DNA Synthesis
When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  Miranda Harmon-Smith, …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
Researchers looked across many organisms to see that aminotransferase enzymes have evolved mix-and-match … this gap, by tracing the evolution of a specific enzyme family called aminotransferases (ATs). These enzymes play a crucial …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… of Natural Prodcast. A little bit of a bonus episode, since I’m off schedule, but this is an important one that … give her a proper introduction and a chance to talk about all the cool work she’s doing over at the University of … JACLYN WINTER: So I actually– well, I mean, not having family in science, it was hard to see what are the different …
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Genomic comparison of deep-sea hydrothermal genera related to Aeropyrum, Thermodiscus and Caldisphaera, and proposed emended description of the family Acidilobaceae
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Webinars on Offerings & Capabilities
Below are a list of webinars that can help you through the submission process by … and resources available for your project. Watch all the webinars here . You can find additional webinars … of the Advanced Photon Source when applying to the FICUS call. (Feb. 21, 2024) More JGI webinars below …
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Natural Prodcast Episode 18: A CSP Primer
UDWARY: It’s been a while, but Natural Prodcast is back again for another round of episodes. If you stick around for … moved on from JGI to do real journalism, and we wish her all the best. Later on, I’ll introduce my new co-host, who … do involve secondary metabolism. JGI’s mission is broadly focused on biological research to better understand energy …
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Plant-Microbial Interactions Group
… fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental … microbial pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are interested in … are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including …
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Microbiome Data Science Team
Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential … demonstrating the power of data science in tackling grand challenges in Biology, with a special focus on microbiome …
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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal … new computational developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – … PDF] End-of-year Goal – Develop one new computationally enabled approach to analyze complex genomic datasets. …
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User Support Analysis Group
We perform analysis for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of …
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