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Institutional User Agreements
Every approved proposal starts with a User Agreement — before any work can begin, including … of sequencing data for synthesis. This agreement, required by the DOE for all work performed in its User Facilities, is … must have their home/employing institution sign a JGI Non-Proprietary User Agreement and Appendix. An Appendix …
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Frequently Asked Questions: Project Management
…   … You can visit the Products & Offerings section of our website for more details, including a downloadable pdf of … products categorized by Science Program.  … The majority of JGI projects come from the user community. Find out about … be accessed via the Genome Portal , at the following sites: Microbes: IMG (citation: https://doi.org/10.1093/nar/gkaa939 …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
In April 2020, we mark both the 50th celebration of Earth Day on April 22, … DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that … communities. He’s focusing on the Arkansas River and how microbes might be influencing its health.  He sat down with …
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Natural Prodcast Episode 23: Aaron Puri
… natural products chemistry, and he has a project with the JGI to synthesize the genes for and explore the chemistry of … some new way of thinking or technology, that’s usually very beneficial to the field. It’s very, very, very … could imagine if you have two colonies of bacteria in the soil or something and they’re competing with each other, if …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, 24 large-scale … effects on these oil-producing species. Many fungi have beneficial symbiotic relationships with plants and bacteria; … Their presence reduces the need to add fertilizers to the soil. diCenzo’s proposal is also notable as he had an …
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Partnerships: Adopt-A-Genome
… a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with … of the claimed genome sequences. This opportunity, provided by the Department of Energy Joint Genome Institute, builds …
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Understanding Wildfire Recovery, Starting in Soil
A metagenomic look at the soil microbes present a year after a wildfire. The Science After … and growth.  This study builds on the pyrophilous fungi the JGI has previously sequenced , and provides a powerful …
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Three Join the JGI User Executive Committee
The JGI User Executive Committee (UEC) recently welcomed three … is a staff scientist at PNNL and thrust lead on PNNL’s Soil Microbiome SFA. She serves as Secretary within the … leverage her understanding of user facility operations and expertise in mass-spectrometry-based metabolomics and …
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Frequently Asked Questions: Proposal Submission
See below for a list of Frequently Asked Questions about our … go to the proposal submission page , login using your JGI account (create one here if you don’t already have an … synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. … No, the …
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The JGI Data Portal: Improving User Experience
The human-centered, agile collaboration between the JGI and the information technology company Truss … Over its 23-year history, JGI has produced more than 13 petabytes of data, accessible through the Genome Portal. “The …
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JGI@25: Building a Better Bean
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that … to their economies. It also plays an important role in soil health through nitrogen-fixation and holds clues for …
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Natural Prodcast Episode 22: Alison Narayan
… … DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This … niche in chemical enzymology. So, we talked about her JGI DNA synthesis project to explore the chemical … WINTER: I mean. ALISON NARAYAN: Yeah, this is beyond my expertise and being able to predict which enzymes might have …
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