Search

… technology in order to enhance the quality of single-cell genomes and directly link functional information with … DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We also apply labeling … To provide additional functional insights into microbial genomes, the JGI now uses laser microdissection to …

IMG (citation: https://doi.org/10.1093/nar/gkaa939 ) Metagenomes and Single Cells: IMG/M   (citation: … are available for functional annotation/curation of your genomes Microbial (IMG–ER) Metagenome and Single Cell (IMG/ M-ER) Fungal (Mycocosm) Algal (Phycocosm) … In general, data …

… and you can see that different Frankia have different size genomes depending on what kinds of plants, and what kinds of … of weird growths on livestock due to you know, bacterial or fungal infections. Yeah, okay. So he identified these things …

C, and you’ve got a new molecule, right? And so if you have 1000 A’s and 1000 B’s and 1000 C’s, then if you’ve got a robot that can … we can find more things. Turns out some of the early genomes that were sequenced for, say, Streptomyces – they …

Proposals aim to sequence and annotate genomes from Antarctica to Africa to global oceans. Through … focus area was inter-organismal interactions, and two fungal proposals focus on symbiotic relationships. Jessie … relationships with plants and bacteria; in many instances, fungal physiology is impacted by these bacteria during …

… where I was a graduate student. Aflatoxin, of course, is a fungal natural product which is a liver toxin when humans … , I think you’ll have heard how a lot of us who work in fungal natural products, especially in the old days, saw how …

… organisms we’re finding– at least by looking at their full genomes — are really not like anything that’s been … not enough time and money. I mean, we have a huge marine fungal project in collaboration with Bill Fenical at Scripps. So we’re looking at biosynthesis of marine fungal metabolites. We’re also looking– now we’re started a …

This first paper integrating multi-omics data from this JGI fungal ENCODE proposal was  recently published in the  … tree of life, enriching the work being done as part of the 1000 Fungal Genomes Project. Funding for the project was also provided …

… yes, sure, right. And yeah, so we worked on the Salinospora genomes. That was a really fun project. We had Brad on and … And later, I looked in all these different Salinospora genomes, and that was great that you started that work. So I … gene classes I could start on. So… but you started with two genomes, right? DAN UDWARY: Right. NADINE ZIEMERT: And then …