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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and … different organizations is discoverable and accessible. Linking the resources of powerful institutions like the JGI, KBase, NCBI, NMDC, EMSL and the Protein Data Bank … with NERSC and the DOE Energy Sciences Network (ESNet), the JGI has unique access to both expertise and infrastructure …
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Data Policy
… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our … of data to support their use by those generating data. The JGI Data Policy applies to research data and analysis … : A period in which data is not publicly available in JGI systems or outside repositories. Full access is granted …
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Webinar: SIP technologies at EMSL and JGI
… Molecular Sciences Laboratory (EMSL) and the Joint Genome Institute (JGI) provide access to a variety of tools that leverage … compounds. During this webinar, EMSL’s Mary Lipton and the JGI’s Rex Malmstrom provided background on the various … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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VirJenDB: a FAIR (meta)data and bioinformatics platform for all viruses
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Natural Prodcast Episode 13: Francisco Barona Goméz
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … pathways of secondary metabolism are producing. It’s a very fair argument. But if you think about it in the context of … thing. Another way to approach it is more related to what JGI does, which is sequence genomes. And we just published …
Learn more
Natural Prodcast Episode 15: Katherine Duncan
… Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to talk to Kate Duncan. And Kate is– I should ask, you … the credit for the organization. [LAUGHTER] Dan Udwary: Fair enough. And so you work primarily in actinomycetes. … you have a question, or want to give us feedback, tweet us @JGI or to me @danudwary. That’s D-A-N U-D-W-A-R-Y. If you …
Learn more
JGI at the AGU Fall Meeting
… This year the AGU Fall Meeting, with the theme “Science is Society,” hosts sessions in New Orleans and online. Register for the meeting here. … talk): “How do we make interdisciplinary sample data more FAIR?” December 16 7:55am, Convention Center Rm 228-230: …
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Data Policy & Support
… Read our research integrity and data code of conduct. … Data Management at the JGI … JGI Scientist Code of Conduct …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … think his energy is infectious. DAN: I’ll say up front that JGI recently started collaborating with Ben and his group to … to the Primer episodes, then you heard me talk about JGI’s Earth Secondary Metabolome initiative, and our …
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A User-Centered Approach to Accessing JGI Data
… When the JGI Data Portal (https://data.jgi.doe.gov/) launched last year, it was only accessible … common set of metadata. For Steve Wilson, JGI’s Systems Engineering group lead, the Data Portal reflects a structural … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Special Initiatives & Programs
… Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, including awards funded through  BER Funding Opportunity … proposals are NOT eligible for BERSS support through the JGI (with the exceptions of DE-FOA-0003453 and …
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Natural Prodcast Episode 17: Cassandra Quave
… is Professor Cassandra Quave from Emory University, with joint appointments in the School of Medicine and College of … you could find me. And really it was my third grade science fair project where I first looked into a microscope and just … people aspects of things, because a lot of what we do at JGI in terms of the sequencing that we do is very …
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