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Natural Prodcast Episode 11: Marnix Medema
… Yeah. Right. Marnix Medema: This was part of a large initiative in the Netherlands at the time called Genbiotics … you to get a bird’s-eye perspective on the biosynthetic diversity element of these genomes. And you see how they’re– … of question have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is …
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Natural Prodcast Episode 12: Nadine Ziemert
… was fascinating, I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE … ZIEMERT: Yes. DAN UDWARY: I think that was one of the JGI’s early moves into sequencing things for the purpose of … see. So it doesn’t seem to be a correlation between biodiversity in taxa and biodiversity in secondary metabolites. …
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CSP Large Scale Call
… emphasis that are listed in the call and leverage the diversity of JGI technical and analytical capabilities. All proposals … free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. … Proposers are encouraged to review the JGI’s sample requirements . Samples that are not available …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … said Simon Roux , the Viral Genomics Group Lead at the JGI.  To understand the microbiome systems underpinning a … aspect of viruses in the environment — their sheer genetic diversity. As pioneers of this field, the JGI has leveraged …
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Natural Prodcast Episode 5: Brad Moore
… first genome sequence with you. Brad: That’s right,  Dan: JGI did it in fact. Brad: That was a magical project I … Paul Jensen and Bill Fenical. And we connected to JGI through the Community Sequencing Program, and they … to look at a cousin organism from marine sediments. And so JGI was interested in that and they worked with us on that. …
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Microbiome Data Science Team
… research.  These efforts include exploration of the global diversity of alternative genetic codes (Science 2014), …  39(1):105-114. Schulz F, et al. (2020) Giant virus diversity and host interactions through global metagenomics. … uncovers gaps in amplicon-based detection of microbial diversity.  Nature Microbiol .  15032 Eloe-Fadrosh EA, et …
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Introducing New Members of the JGI User Executive Committee
… The JGI welcomes three new members to their User Executive … to help develop the JGI’s community outreach efforts with diversity, equity and inclusion in mind. Microbiome ecologist Shade became …
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Natural Prodcast Episode 22: Alison Narayan
… niche in chemical enzymology. So, we talked about her JGI DNA synthesis project to explore the chemical … of flavin independent monooxygenases with the help of JGI’s DNA synthesis grant. And that having a whole panel of … made it onto our list is because we wanted to have diversity. And so we wanted a profile across that protein …
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An Earth Month Look at Sustainability Efforts at the JGI
… a DIY Succulent Workshop and Plant Sale. All year, the JGI helps support finding solutions to clean energy and environmental challenges. And many JGIers work to connect those big goals with their everyday … a specific push going on at the JGI — the ZERO Waste Initiative — that works to prepare the IGB to be the first …
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JGI announces 2024 New Investigator portfolio
… The JGI is eager to work and share our tools with a widening … whose proposals were accepted for 2024. Harnessing the JGI’s  resources, these researchers will dive into a range … deadline for proposal submission is October 4, 2024, for inclusion in the December 2024 review. You can also find …
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Introducing New Members of the JGI User Executive Committee
… The JGI welcomes three new members to the JGI User Executive … noted, “I would also like to offer my insights in promoting diversity, equity and inclusion (DEI) in STEM disciplines to address JGI research …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … to evolution of genomic mechanisms — resulting in the diversity of fungal phenotypes and a myriad of ecologies.” The Open Green Genomes Initiative is the product of a 2018 Community Science …
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