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Polar Phytoplankton Need Zinc to Cope with the Cold
… other oceans. That zinc turns out to be extremely important for polar phytoplankton.  After peering into the function and activity of phytoplankton genes and … observations with data on microalgal communities across different ocean latitudes from pole to pole, using …
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An Earth Month Look at Sustainability Efforts at the JGI
… those big goals with their everyday activities, striving for sustainability in lab spaces as well as offices. These efforts dovetail into sustainability commitments for the wider Berkeley Lab. … lunch break, she got to help tackle a challenge at a much different scale — moving a 3-foot long, spiny cactus into …
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Accelerating Metagenomics Discoveries with Deep Learning
… participants in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing … data gathered from whole samples rather than single cells or isolated strains, is easy to generate, but … learning, data is passed through algorithms organized into multiple interconnected layers. The architecture of …
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Gene Expression: From On-Off Switch to Dial
… approach to expression, scientists can now opt for various shades of grey. The ability to fine-tune the … that were missed using traditional approaches. This novel form of intermediate expression, when used in addition to … and included researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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Ronald de Vries
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… Through the  “Facilities Integrating Collaborations for User Science” (FICUS) call between the JGI and the  … for research over 100,000 samples and specimens of over 60 different types of NEON samples and specimens per year. This … Data & Samples tab. Front their you can click on Data and into the Data Portal where if you click into a data product, …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… who has been awarded the van Niel International Prize for Studies in Bacterial Systematics for the triennium 2017-2020! Established by the University … Microbial Genomics Program since 2009 and heads the Single Cells group . Woyke also holds appointments as Adjunct …
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Computationally Classifying Fungal Lifestyles
… known to infect most major food crops and feedstocks for biomass and biofuel production. Learning about the … evolution of  Dothideomycetes could provide more insights into how these fungi have adapted to stress and host … A team led by researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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Ecogenomics of Groundwater Phages Suggests Niche Differentiation Linked to Specific Environmental Tolerance
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Methane yield phenotypes linked to differential gene expression in the sheep rumen microbiome
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Niche differentiation among annually recurrent coastal Marine Group II Euryarchaeota
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Genomic differentiation among wild cyanophages despite widespread horizontal gene transfer
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