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A Practical Approach to Using the Genomic Standards Consortium MIxS Reporting Standard for Comparative Genomics and Metagenomics
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Decoding Yellowstone’s Microbial Mats
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JGI@25
… Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We … to advancing the frontiers of environmental and energy genomics. The two-story mural at the Integrative Genomics Building was painted by Berkeley-based artist Nigel …
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Parallel Evolution of Truncated Transfer RNA Genes in Arachnid Mitochondrial Genomes
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Virus-Microbe Interactions of Mud Island Mangroves
… at one of the DOE national laboratories or national user facilities. Baker had worked with the JGI through a … wetlands in south Texas,” he explained. “In terms of my project, I wanted to incorporate that CSP, but also look at … carbon cycling in coastal mangroves. His work centers on samples collected on Mud Island – “it’s essentially a mud …
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Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
… the specialized software and supercomputers behind this project. But every part of this project depends on lakewater samples — so this episode is a look at how researchers get …
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PMR5, an acetylation protein at the intersection of pectin biosynthesis and defense against fungal pathogens
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … fellow in the Juenger lab and continues to work on the project from a lab at Michigan State University that is … sites. “This paper is a combination of really cutting-edge genomics and genetic analysis with large scale data …
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A Sorghum Pangenome Opens More Doors to Discovery
… Nature . “We wanted to build a resource that demonstrates DNA sequence diversity, gene repertoire, and the phenotypic … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of Energy, the Gates Foundation, the Advanced Research Projects Agency-Energy (ARPA-E) and the United States Agency …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint … (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility at Lawrence Berkeley National Laboratory … Lab), is to become the leading integrative genome science user facility enabling researchers to solve the world’s …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… a more systematic picture through single-cell and metagenomic sequencing. A team co-led by Mária Džunková, … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … the cell. The team assembled 130 genomes from their sample — a small proportion of the sample’s billions of …
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