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The Genome Portal of the Department of Energy Joint Genome Institute
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The Phaeodactylum genome reveals the evolutionary history of diatom genomes
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Phytozome: Tutorial Workshop from 2022 CROPS Conference @HudsonAlpha
… for Biotechnology. Phytozome is the Plant Comparative Genomics portal of the Department of Energy Joint Genome … and facilitates accurate and insightful comparative genomics studies. …
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Supercharging SIP in the Fungal Hyphosphere
… automated aspects of a commonly-used process for studying microbial communities, with results published in the  … things like biomass and  biofuels . However, AMF and the microbial communities they inhabit are notoriously difficult … an arduous wet lab process. Typically, after incubating microbial communities with labeled food or water, the …
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Zhong Wang
… new bioinformatics solutions to support JGI in adopting new genomics technologies, scaling up genomics analysis to … analyses, next-generation transcriptome de novo assembly, metagenome and metatranscriptome assembly, Hadoop based on … scale data analysis in the cow rumen and sheep rumen metagenome projects. Standing at the intersection between the …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
Earth’s surface is reconstructed by combining a study of microbial communities (metagenomics) and a chemical labelling approach. The Impact …
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JGI at the AGU Fall Meeting
… on Intensive Agricultural Lands Changes Nitrogen Cycling Microbial Communities and Reduces N2O Production Potential … A finely tuned, time-resolved analysis of viral and microbial communities in the Erpe river” 8:30am Convention … continental-scale context for thousands of newly sampled microbial genomes from North American watersheds (Invited)” …
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Triggering Morel Fruiting
Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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SIPs with Standards
Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can show which … reusable, and more insightful, for the future of studying microbial communities.   …
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Effects of sample treatments on genome recovery via single-cell genomics
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Expanding the genomic encyclopedia of Actinobacteria with 824 isolate reference genomes
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2024 Progress Report
The Integrative Genomics Building (IGB) seen above is home to the DOE Joint … algorithms to identify billions of protein sequences in metagenomes.  We continue to engage with our user community … outreach activities and hosting visiting scientists at all stages of their careers. Our staff have organized, chaired …
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