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… The Science The  Metagenome Stability Diagram — a tool within the Integrated Microbial Genomes and Microbiomes … mSystems paper , a team at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … constraints, etc. of natural environments shape specific genomic signatures that could be used to hypothesize …

… A study involving six brown rot fungi reveals the genomic changes Serpula lacrymans has undergone in adapting to … from Europe, that was sequenced and analyzed by the JGI. The researchers found that S. lacrymans var. lacrymans … to see how the Serpula fungi have adapted in an environment with little to no competitors for resources. On wood blocks …

… researchers investigated the role that bacteria living within a host (endosymbionts) have on fungal host … this model, researchers also generated the first transcriptomic dataset of sexual reproduction in early fungi and … and experimented with the fungi and bacteria, while the DOE JGI team sequenced and annotated a host genome (Rm ATCC …

… and environmental interactions. Terpenes are also economically important because of their use in industrial … Corymbia are more abundant in the drier parts of Australia with lower quality soils and even in the desert areas with … proposal by the DOE’s Joint BioEnergy Institute (JBEI), the JGI worked on resequencing several eucalypt genomes to …

… inside the host’s genome, living quietly and replicating with their host indefinitely. Now, in studying a microbial … a more systematic picture through single-cell and metagenomic sequencing. A team co-led by Mária Džunková, … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis has … of the genome sequence also provides insights into how the multiple chromosomes of Miscanthus arose by ancient … Department of Energy (DOE) Bioenergy Research Center, along with researchers from the Energy Biosciences Institute, the …

… a feedstock for biomass-based biofuel production. As seen with many commonly cultivated commercial crops such as … study conducted by our research team surveying the genomic and phenotypic diversity across the natural range of … biofuel yield through a changing future. Switchgrass has multiple naturally occurring ploidy levels, called …

… utilizing a variety of technologies to improve the JGI’s capabilities in the areas of metagenomics, single-particle genomics, and metabolic engineering. …

… software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for user … and implementation of microservices in conjunction with the IMG platform. …

… led the development of an integrated platform for tracking JGI's sequencing projects and data warehousing. This … Management Systems (LIMS), bioinformatics, and genomics data management. He has worked at several renowned …

… TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata …

… JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest release of IMG database …