Results
Originally conceived as a UC Merced graduate student summer research experience at the JGI, the …
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Brachypodium model system traces polyploid genome evolution. Flowering plants abide by … quality genome assemblies for all three grasses. With these datasets, researchers made a pan-genome containing four B. … . … Brachypodium distachyon on Phytozome Data Portal …
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Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and incredibly complex — making it difficult to … Monell Foundation. … Ceratopteris richardii on Phytozome Data portal … Datasets …
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The United States is the world’s leading soybean producer , and soybeans are used to produce biodiesel. … . … Phakopsora pachyrhizi on MycoCosm Data Portal …
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Populations of Antarctic lake microbial communities change with the seasons. … were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study recently published in …
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Every summer, the flagship JGI-UC Merced Internship Program invites undergraduate and graduate students to engage in real, impactful … deep dives into genomics, computational tools, and big data. …
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The PhycoCosm data portal allows anyone to freely investigate the genes of … photosynthetic organisms. PhycoCosm is one of the largest data repositories of its kind, with an interactive browser …
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A group led by JGI scientists have made strides in improving and applying a method that … practice ideas presented in a Trends in Biotechnology review piece by Yoshikuni and JGI colleagues Jing Ke and …
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Dr. Rokhsar joined the DOE Joint Genome Institute in 2000 as the founding Associate Director for Computational … IBM Watson Research Center, Yorktown Heights, NY … Publications … 2018 Marthella Foskett Brown Chair, … Genomics and Computational Biology … Education … Selected Publications … Awards and Honors …
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Marcel is in charge of several production pipelines (gene calling, functional annotation … metagenomes. He also works on automating intra-department data exchange and assists with large scale computations on …
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Machine learning methods were applied on sequenced fungal … of fungi, by lifestyles. The machine “learned” to identify data generated in part through the 1000 Fungal Genomes … fungal lifestyles of saprobes and pathogens based on the data provided. In this proof of concept test, the team …
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