Performance evaluation and tuning of BioPig for genomic analysis
Results
Poisson hurdle model-based method for clustering microbiome features.
PlantSEED enables automated annotation and reconstruction of plant primary metabolism with improved compartmentalization and comparative consistency
Genome Sequences for Six Rhodanobacter Strains, Isolated from Soils and the Terrestrial Subsurface, with Variable Denitrification Capabilities
Discovery of enzymes for toluene synthesis from anoxic microbial communities
Population Level Analysis of Evolved Mutations Underlying Improvements in Plant Hemicellulose and Cellulose Fermentation by Clostridium phytofermentans
BinaRena: a dedicated interactive platform for human-guided exploration and binning of metagenomes
Bioinformatic analysis of the distribution of inorganic carbon transporters and prospective targets for bioengineering to increase Ci uptake by cyanobacteria
Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi
Cell-free prototyping enables implementation of optimized reverse β-oxidation pathways in heterotrophic and autotrophic bacteria
Comparative genomics reveals mechanism for short-term and long-term clonal transitions in pandemic Vibrio cholerae
Harnessing symbiotic bacteria for disease control
