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Calculating the Costs of Multiple Switchgrass Gene Copies
… of the genome , which can have pronounced ecological and evolutionary consequences. A previous study conducted by our … (4X) tradeoff. Furthermore, niche modeling suggests niche evolution between 4X and 8X linked to climate adaptation. … additional genomic resources to address long-standing evolutionary ecological hypotheses about how C4 perennial …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
Lavenstein Bendall and mentor Juan C. Villada, Ecology & Evolution of Self-Catalytic Introns across Earth’s …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… genome infrastructure with a reasonably accessible system,” said Schmutz. “Building the pan-genome and … because they’re very productive even in high heat while C3 crops have become less efficient at photosynthesis, a … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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Taking Stock of the Known and Unknown Microbial Space
… available genome sequence data generated over the past three decades, their study assesses what fraction of the … “While computationally derived MAGs have been a revolutionary tool for microbiology, it's a call to balance,” … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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Frederik Schulz
… ecological roles of microeukaryotes in terrestrial ecosystems. Additionally, Dr. Schulz is leading a DTRA-funded … temperate dimictic lake. Microbiome . Camargo A. et al. 2023. Identification of mobile genetic elements with geNomad. … academic achievements (2008) … Education … Selected Publications … Awards and Service …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
Environmental Research “There are two kinds of scientific revolutions,” Ari Patrinos opened with this quote from Thomas … his presentation of the times that he brought together the three lab directors to work through the project. They faced … Hardworking Team Todd Anderson , Director of the Biological Systems Science Division at DOE Office of Biological and …
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Jeremy Schmutz
Following the completion of the human genome project in 2003, he developed sequencing, assembly, and improvement … Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres. Nature 492: 423-427. … Award … Plant Science Program … Education … Selected Publications … Awards and Honors …
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Nigel Mouncey
… for Industrial Microbiology and Biotechnology in 2022-2023. … Nigel Mouncey is the Secondary Metabolites Program head … World Bio Markets Bio-based Business Person of the Year Publications Committee Chair (2016- ), Society for … Program … Education … About the JGI Director … Selected Publications … Awards and Honors …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… at these gardens. Building off this work, researchers at three DOE Bioenergy Research Centers (BRCs)—the  Great Lakes … plant’s traits and genetic diversity,” said John Lovell, an evolutionary biologist at HudsonAlpha and first author of … across the chromosomes. “In the past, we needed model systems to test genetic hypotheses in species with large and …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
BGC Repertoire in Actinobacteria Over the years more than 3,400 genomes have been sequenced from curated DSMZ … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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Ken Chu
… tools and user interface components for the IMG family of systems. …
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A Collaboration to Improve Plant Genome Annotations Across Species
… allowed us to pinpoint and rank biologically relevant and evolutionarily conserved genes that could be potential … comparable study, where plants were subjected to three nitrogen sources (urea, ammonium, and nitrate) as the …
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