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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… This webinar focused on how the JGI employs single-molecule, … the standard analysis pipeline but can be done on request by the PI. We currently use the ‘Base Modification Analysis’ … metagenomes be mapped to long-read metagenome assemblies by JGI and uploaded to IMG? A:  Depending on the project …
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Yasuo Yoshikuni
… has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of DNA synthesis, strain engineering, and biosystems design for DOE-mission-relevant … to learn more about the program's areas of focus, major initiatives and more.  …
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When “The Blob” Made It Hotter Under the Water
… Data from marine heatwave event may foreshadow climate change impact on … model of how marine microbial communities are affected by warming events. More time-series studies could help … . They reported that the heatwave caused the microbial populations to cluster along the water column, like layers …
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Tracking the Origins of Methane-Producing Microbes
… Mini-Metagenomics Approach Helps Identify Novel Archaeal … The archaeal genome was detected in samples collected by Stephen Quake’s team at Yellowstone National Park’s … these samples by sorting the microbes into small pools of cells that were then sequenced separately. From these …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems …
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Alabama A&M Interns Access An Abundance of Knowledge
… In 2024, the DOE Joint Genome Institute and Alabama A&M University piloted an internship … to the JGI for research training experience. Enabled by the DOE RENEW initiative, undergraduate student Ti’Yanna …
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Refining the Process of Identifying Algae Biotechnology Candidates
… to summary above^ as well ] The Science The recipe for growing algae as a source of sustainable biofuels seems fairly simple: place these algae in a … cook knows, recipes can be refined for best results, often by starting with identifying the right ingredients. …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… data to better understand how U.S. ecosystems are changing.  Through the  “Facilities Integrating Collaborations … webinar complements a  recent webinar co-hosted by the JGI and EMSL inviting researchers to apply for a … Structural Molecular Biology .  Watch this webinar hosted by EMSL to learn more about BioSANS. Letters of Intent are …
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Streamlining Regulon Identification in Bacteria
… RIViT-seq technology could speed up associating transcription factors with their target genes. The … Regulons are a group of genes that can be turned on or off by the same regulatory protein. Researchers demonstrated the … sets associated with functions like stress responses and cellular differentiation. The tough part is identifying the …
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Ben Bowen
… Specializing in mass spectrometry-centered projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and integrating mathematics and chemistry for … BS – University of Arkansas, Fayetteville, Chemical Engineering Ph. D. – Arizona State University, Tempe, Chemical …
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An Integrated Dataset to Understand Ecosystem Interaction
… yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar trees and their … to large ecosystem-level processes for the first time. By collecting data from 27 different poplar ( Populus … of ecosystems and contribute to stabilizing streambanks, wildlife habitats and water-quality regulation. Focusing on …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… gas, regulate Earth’s climate. Most methane is produced in environments without oxygen through a process called … of archaea called  Euryarchaeota . These ancient, single-celled organisms thrive in most  environments devoid of … little makers rely on to survive. Now, new research enabled by the U.S. Department of Energy (DOE) Joint Genome …
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