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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… biological contexts. The program fosters intimate, dynamic interactions, offering an unparalleled platform for …
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Fungus Fuels Tree Growth
… organic matter, or as an endophyte, living between a plant’s root cells. The fungus is almost always found among … soil mixture, publishing  the results in  Molecular Plant-Microbe Interactions . The results were striking. Adding PM193 …
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
Madison. And Trina McMahon's lab has been sampling the microbes of that lake for over 20 years, to understand how …
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Host population diversity as a driver of viral infection cycle in wild populations of green sulfur bacteria with long standing virus-host interactions
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Synergistic interactions between anammox and dissimilatory nitrate reducing bacteria sustains reactor performance across variable nitrogen loading ratios
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The Fast Changing Landscape of Sequencing Technologies and Their Impact on Microbial Genome Assemblies and Annotation
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Metabolomics Technology Group
… and dynamic metabolite networks of environmental microbes and how they transform their environment. Research …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… green sharpshooter. In 2012, single cells isolated from the microbes found in the oil plume from Deepwater Horizon oil …
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JGI Early Career Researchers Featured in mSystems Special Issue
… outline more targeted approaches to reconstruct individual microbes in an environmental sample beyond the … into several small pools before sequencing to recover rare microbes. The technique was applied to a recent Nature … can develop high-throughput and high-resolution studies of interactions between host cells and viruses in the …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… like a single cell. The fact that they were a ‘macro’ microbe was fascinating!” “She understood that it was a … occupy on a global scale, it’s less than 1% of the coastal area worldwide. But when you then look at carbon storage, … which is a process analogous to photosynthesis for plants.” Another outstanding question is whether the new …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… a complex pattern of evolution for genes related to eating plant compounds in both the oceanic and hot spring  … bacteria lack complete biochemical pathways to break down plant material on their own, they likely cooperate with … that the bacteria have enzymes to synthesize or degrade plant hormones, meaning its land-dwelling counterparts could …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
Genome Institute hosted several UC Merced students this past summer. This year’s cohort for the JGI-UC Merced … mentors are listed below, along with their project focus areas: Undergraduate Interns Andrew Lin and mentor Vy Duong, … Study of Root Colonization by Resident Phages of a Plant Growth Promoting Rhizobacterium Graduate Interns …
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