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Complete Genome Sequence of Nitrobacter hamburgensis X14 and Comparative Genomic Analysis of Species within the Genus Nitrobacter▿ †
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The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution
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Effects of Polar Light Cycle on Microbial Food Web
… evolved separately from other similar systems, and offers new clues into a unique environment in the natural world. … The Impact From the polar regions to the deep ocean, cold environments occupy more space on Earth than any other … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Taking Stock of the Known and Unknown Microbial Space
… technologies have led to an abundance of microbial genomes becoming available to the global research … , researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Seshadri said. “It’s a reminder of the urgency to cultivate new microbial species.” Targeted Explorations for …
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Fishing for Novel Cellulose Degraders
… by Tanja Woyke at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … can uncover more about cellulose-degrading microbes. The new technique is another tool for microbial ecologists to … for a new genus level member of the novel candidate phylum Goldbacteria. They’ve proposed the name  Candidatus …
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Game On: High School Students Drive Everglades Metagenomics Study
… email request reached  Emiley Eloe-Fadrosh , the Metagenome Program Head at the  U.S. Department of Energy (DOE) Joint Genome Institute (JGI) , a DOE Office of Science User … JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) portal for their sample analysis.  The class had to sift …
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Enlarging Windows into Understanding Gene Functions
… four letters represents an organism’s genetic code, or genome, which underlies physical features and functions. … factors have been repurposed during evolution to control new functions,” O’Malley said. “Combining the two approaches … understand known biological functions as well as discover new functions. To help drive JGI User science we have …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… archaea and eukaryotes, and they range in particle and genome size from small, to large and even giant. The genomes … proteins, and virus diversity in this group expanded 10-fold from just 205 genomes, redefining the phylogenetic tree … environmental conditions. Function prediction on the 2,000 new giant virus genomes led the team to uncover a prevalence …
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SPRUCE-ing Up Science
… one of the first students to participate in the DOE Joint Genome Institute (JGI)-UC Merced internship program, … temperatures that normally would kill the moss may hold clues to how these carbon sink environments can continue … mediate Sphagnum peatmoss resilience to warming . New Phytol. 2022 Jun;234(6):2111-2125. doi: …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… genus Streptomyces are nature's chemical factories. They hold genetic blueprints for dozens of complex compounds, but … Researchers with the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … promoter sequences within these gene clusters, offering new regulatory targets for engineering efforts. Importantly, …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… insights into environmental tendencies The Science The  Metagenome Stability Diagram — a tool within the Integrated Microbial Genomes and Microbiomes (IMG/M) platform — has been … predicted functional and metabolic roles across global metagenomes (within IMG).  The Impact The initial analysis …
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A single-cell genomics pipeline for environmental microbial eukaryotes
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